Ll_transcript_366233

• Id Trinity: TRINITY_DN46348_c7_g8_i2
• Name Transcript: Ll_transcript_366233
• Sequence: GATTTTAATATAGAAACGCTCGCACACGATTACTCACTCATCTCTCTCATTCTCTGAATGATGATATAAATTTTGTCTTTCAACACAACATTCTCATTTT TCAAACATTCTTTTCTTCGCTCTGAAATTCAGTATCAGAGATTGATTCCCTCAGTATCTTGATATTTTCAAAGAATCTGTTAAGTAGAGAATCTTTTAAG GATTGCTCCAAAGTCTTTAGGATTGAAATATAACACACAATGGTCACAAAAATCCGGAAAAATGCGAACGACTCTCCTATTCCAAAACCAGAGGTTGGAG AGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTGCCTTTAAGAAGTCAAA ACCTCGTTCTGTGGAGAGAGTTTTGACCAAGGAGACACAACTTCATGTCGCACTGAAGGAGCTGAACAAGTTAAAGGAACAAGTAAGGAATGCTGAAATT ACTAAGGGTCAAGCCCTTGTGGAGATTGAAAGGTCTAGAACGACAATCGAGGATTTGACTCAAAAGCTAAAAGTTATCAGCAAATCCAGAGAGTTGTCGA TCAAAGCCACAGAAGATGCAAAGAGTCAGGCCAACCAGCTTAAAGAAGAAAAGCATGGGAATCCTGATGAAACACATGGTGCTTCAAAAGAAGAGTTAGA AGCTGCAGTTAAAAGATATGCTTCTGTCATTGCAGAACTTGATACTGCAAAGCAAGAACTGAAGAATATCCGTCTGGAGTATGCTTCGTCCTTGGAGGCG AGAGCGTCTTATTTGAAGCAAGCAGTAGAAGCTGAAGATGCATTGAAGGAAAATTCCGAAAGAGCATCTCAGCTGTCTAATGAAATTTCAGTTGTACAGG ATTCAATTGGTCAAACCAAGTTTGTAGCTATTGAAGCGCAGAAACAGCAATCAGTTATATTAGCTGAGAAAGATGTTCTAAGACGATCATGTAAAGCCAC TCTCGAAAAATCTGAAAAGGAATTGCTTACTTTGAAGAAGGACTTCAATCCTGAGCTCACAAAAATACTTGAAGTGCGACTGTCTGAGACAATGAGCGAA ATTGAGGCTCTGCAAAAGGAAATGGAAAATAAAAGGAAATCAGACTTGGATTCTATCAAAATGGTCACTTTGGAGCTTGATGGTGCTAAGGAGTCACTGC AGAAAGTAGCAGATGAAGAAACCTCTCTTAGAAGCTTGGTGGAAACTCTTAAGATGGAACTAGAGAATGTAAAGAGAGAACATTCTGAGTTGAAGGAGAA AGAATCTGAAACTGAATCTATCGTTGGGAATCTTCATGTCAAGCTCCGAAAAAGTAAGTCCGAGCTCGAAGCCTGCTTGGCAGAAAAATCTAAAGTCAGT GGTGCATCTGAAGAAATAATCTGGACACTGAACCAGATGCAAACGGAAGCTGAAACTGCACGGCGAGAAGCAGAAACAATGAATAACAAGGCAAAAGTGT TGAAGAAGGAGCTTGAATTTACCGCACTTGTATTAAAAGATGCAGAGATATGTCTTAGTGCAGCATTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGGA ATGTGCTGTGAACCAGATCACAGAGCTAAATGAAAGGACCAGTGCTGCACGTGTGTCAACATCTGAATCTGGTGGCAAAATATCAATCTCAAGGGAGGAG TTCGAGTCACTCAGTCGGAAAGTCGAGGAGTCTGACAAACTAGCAGACATGAGAATAGCTGCCGCCAAGGCACAGGTTGAAGCTGTGAAGGCCAGTGAAA ATGAGGCTCTGAATAGGTTAGCAACAACTCAGAAGGAGATCGAGGATTTGAAGGCTGCGACACAGGAAGCGTTGAAAAAGGCTGAGATGGCTGAAGCGGC GAAGCGGGCAGTGGAAGGTGAGCTTCGGAAGTGGCGTGAGAGGGAGCAGAAGAAGGCCGCAGAAGCTGCATCCCGGATATTGGCTGAAACACAGATGTCG TTGGAATCATCTCCTCAGCACTACAGGATTAAAAATCAGAATCCGCATCAAACAACAGCAGAGGTGAAGAAGTTAGAAAAAGAAAAGGTTTTGGTTTCGA AGAAAGTTTTCATGCCTAGTATCAGTGGTATCTTCCACAGAAAAAAGAACCAAGTTGATGGTGGATCTTATCTGCCTGGTGAGAGTCCTCTTTGAAATTT AATATTTGTAGTTGTTTGTGCAGCTCTTAAATAGCTGAATGTGATAGAGACATGATTTGTGTGTAGTTCAGACTTCATACATTTGGTCGAATTTTATCTT TGTACTCTATTTGAAGAAAAATATTGTGAAGTTTGGGACAAATTTTGTTATGCATCGTGTAAATTTTACCAATCAGAAGATTATAATACTTAGAGCATTA TGACATTATTCGATCCATCTAGCTAACTGCACCCAATAAGATAAAGATTTGGTTGTGGTTGTACTTGGCTTTCACGTCCGGTGGTTTCGTCCAATGCTGT CAAAATCGGACCTGAAGGGAAAATTTGGGAACTAGTCTGAAGTGTAGTTTTGGTTGTCATTATTATTTCCCAAATGAGTTTGACTACATGTATTTATTAT TTTGTACGTCTAAGTTTACCAATTTTCCAATTCCTTGTCTTTATTATTTCTTTTCGTAGGAGCAAAGCTTTGTTGTAGTAATAATAGCTCATTTAAAAAG ATGTCGTCAATAGTATAAGTATTGGATATTAAATGTAGACTGAATAGTAAAGGATTAGAGATCACTTGTATTGAGAAATTTGTCAATATTCAATTAATAT ATACTAAGTAATATAATTATTCTTTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_143942;
• Additional information: details;

Expression of Ll_transcript_366233

FPKM

• PAB: 0.5
• PNAB: 5.7
• PS1: 7.4
• PS2: 2.5
• PS3: 4.7
• PW1: 5.7
• PW2: 6.6
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366233

• Blastp: WEB family protein At5g55860 from Arabidopsis with 53.51% of identity
• Blastx: WEB family protein At5g55860 from Arabidopsis with 52.98% of identity
• Eggnog: protein PLASTID MOVEMENT IMPAIRED(ENOG410Y9HM)
• Kegg: Link to kegg annotations (AT5G55860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447058.1)
• Pfam: Weak chloroplast movement under blue light (PF05701.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;