Ll_transcript_366235

• Id Trinity: TRINITY_DN46348_c7_g8_i3
• Name Transcript: Ll_transcript_366235
• Sequence: GATTTTAATATAGAAACGCTCGCACACGATTACTCACTCATCTCTCTCATTCTCTGAATGATGATATAAATTTTGTCTTTCAACACAACATTCTCATTTT TCAAACATTCTTTTCTTCGCTCTGAAATTCAGTATCAGAGATTGATTCCCTCAGTATCTTGATATTTTCAAAGAATCTGTTAAGTAGAGAATCTTTTAAG GATTGCTCCAAAGTCTTTAGGATTGAAATATAACACACAATGGTCACAAAAATCCGGAAAAATGCGAACGACTCTCCTATTCCAAAACCAGAGGTTGGAG AGATTGACACCAGTCCACCTTTTCAATCTGTTAAAGATGCTGTCTCTCTATTTGGTGAAGGTGCTTTCTCTGGTGAAAAACCTGCCTTTAAGAAGTCAAA ACCTCGTTCTGTGGAGGTAATTGCCATTGTTGTATTTGTTTTATGTTTGAAACTACAAATCCCTTGCTACATTGCAAAATCATGTCTGAGAATTTGCATT TTACGAATGTGTATACTGTAAATTTATAATAACTGTAGTGTAAACCTAGTATGGTTTTTCAAGATTGGCTATTTAATATTTAACCCTTAAGGAAAAAAAT ATTAAAACTTTGCGGAATGTCATCTGAACTTTATGAAGTATTAATAATACACTTTTGATCATACAGTTACTTAGTTTACTAAATAAAGTTTTTACATTAT TATATTTCTTGAATTTCTTCCCATTTTCAAGGAGTGATTCCGACTCTATTAATAATGTCATACTTGTTGTGGAATCATGAATCTTGAATATAATAAATCA TAGCGTTCCTATTTTTTCATTGTTTTAGGTATGCTTTATGTACAGATGAAATTGTGCTTCTTTTTACACATTGGATCTATGTTCTATTTGAGAATACACC TGCTTTTTGTCTCTGTTGTCAATAGCACTCTCACTGGGCATGACCGCAACACTCACTAGCCATTGCAGAGACCCACCTTCCTCGCACAAACCCATTGAAT AGAGACCTACTTTCTTCTTCCTTCGGTTTTATTTCAGCAGCACCCACCCCATTCAACAAGTTCCTAGCAGGATAAAACCGTTTTACACTTGCTGCATTGT TTTCGGCTTCCTACTTTTGTTTCATGCATCCGCTAGTTCTATTTCAGCTTCTGTTTCAGCCTTCTCTGGCCAAACCGGCCTCTACATTCATGTGGTTTTT GACCTTTTGTTATCACTAACTTATTGTTATTAGTTATGCTTTACATTAAAGGTAATCATGTCCTTAAATTATAGATTTTGAGTATTAACGATTAGTATGT GTATGAATAATTGTTTAGTGTATCTGTTGTCTTTAGTATAGTGGTCATCCCACTATCTGCTATACCGCTAGTGTTTTTGAGGTTGGCCTCTCCACACAGT TATCTGGGATTGATTACTATGCTTTTCGTGTTATACATCTTCTGATTATTACGATTTATGAGTCTTCCTCTATCAATCTAGACTTATTTTTGTTTTTATT TAAAGAGTGATGATTCTGAATTTAGCTGTCTAGAAGTTGTAAATGGTATAGAGGATAAATCTTCTTTCTTAAATGGTCTGTACTCTGAACAAGATCCTTC TGCAGATTTATAGCTCATCATAATTAGAAACAATACTTATGAGGTGTCTCAACATTATTCTTGGTTGAAAATGATACTAAAACTACATTGGTAGATATTA TGTTTTCGATTAGTGCCTTTTGATACACTTAATTGTATTGCCATCTTACTGTTATTCCAAACACATTAATTTTCAGCTACTATGTTACTCCATAAATTGT AAACTATGGCAATAAAGTTAGGTTTGTTTAGTTTTAAAGATTTGTGCAAAATGTTACTGTAGCTTTCATCATTTAAAAGGGAATATCTAATGTACCATTA AACTAAGCTATCTGGATATTATTTTCTTTTTTTTTCTCCTTTCAAGGTAGCTTTGAATGTACTTTTTTCTTTGTATTTTGCGATTAACAAAGCTTTGCTT TTTCACTAGAGAGTTTTGACCAAGGAGACACAACTTCATGTCGCACTGAAGGAGCTGAACAAGTTAAAGGAACAAGTAAGGAATGCTGAAATTACTAAGG GTCAAGCCCTTGTGGAGATTGAAAGGTCTAGAACGACAATCGAGGATTTGACTCAAAAGCTAAAAGTTATCAGCAAATCCAGAGAGTTGTCGATCAAAGC CACAGAAGATGCAAAGAGTCAGGCCAACCAGCTTAAAGAAGAAAAGCATGGGAATCCTGATGAAACACATGGTGCTTCAAAAGAAGAGTTAGAAGCTGCA GTTAAAAGATATGCTTCTGTCATTGCAGAACTTGATACTGCAAAGCAAGAACTGAAGAATATCCGTCTGGAGTATGCTTCGTCCTTGGAGGCGAGAGCGT CTTATTTGAAGCAAGCAGTAGAAGCTGAAGATGCATTGAAGGAAAATTCCGAAAGAGCATCTCAGCTGTCTAATGAAATTTCAGTTGTACAGGATTCAAT TGGTCAAACCAAGTTTGTAGCTATTGAAGCGCAGAAACAGCAATCAGTTATATTAGCTGAGAAAGATGTTCTAAGACGATCATGTAAAGCCACTCTCGAA AAATCTGAAAAGGAATTGCTTACTTTGAAGAAGGACTTCAATCCTGAGCTCACAAAAATACTTGAAGTGCGACTGTCTGAGACAATGAGCGAAATTGAGG CTCTGCAAAAGGAAATGGAAAATAAAAGGAAATCAGACTTGGATTCTATCAAAATGGTCACTTTGGAGCTTGATGGTGCTAAGGAGTCACTGCAGAAAGT AGCAGATGAAGAAACCTCTCTTAGAAGCTTGGTGGAAACTCTTAAGATGGAACTAGAGAATGTAAAGAGAGAACATTCTGAGTTGAAGGAGAAAGAATCT GAAACTGAATCTATCGTTGGGAATCTTCATGTCAAGCTCCGAAAAAGTAAGTCCGAGCTCGAAGCCTGCTTGGCAGAAAAATCTAAAGTCAGTGGTGCAT CTGAAGAAATAATCTGGACACTGAACCAGATGCAAACGGAAGCTGAAACTGCACGGCGAGAAGCAGAAACAATGAATAACAAGGCAAAAGTGTTGAAGAA GGAGCTTGAATTTACCGCACTTGTATTAAAAGATGCAGAGATATGTCTTAGTGCAGCATTGGAAGAAGCAGAAGCAGCAAAAGCAGCCGAGGAATGTGCT GTGAACCAGATCACAGAGCTAAATGAAAGGACCAGTGCTGCACGTGTGTCAACATCTGAATCTGGTGGCAAAATATCAATCTCAAGGGAGGAGTTCGAGT CACTCAGTCGGAAAGTCGAGGAGTCTGACAAACTAGCAGACATGAGAATAGCTGCCGCCAAGGCACAGGTTGAAGCTGTGAAGGCCAGTGAAAATGAGGC TCTGAATAGGTTAGCAACAACTCAGAAGGAGATCGAGGATTTGAAGGCTGCGACACAGGAAGCGTTGAAAAAGGCTGAGATGGCTGAAGCGGCGAAGCGG GCAGTGGAAGGTGAGCTTCGGAAGTGGCGTGAGAGGGAGCAGAAGAAGGCCGCAGAAGCTGCATCCCGGATATTGGCTGAAACACAGATGTCGTTGGAAT CATCTCCTCAGCACTACAGGATTAAAAATCAGAATCCGCATCAAACAACAGCAGAGGTGAAGAAGTTAGAAAAAGAAAAGGTTTTGGTTTCGAAGAAAGT TTTCATGCCTAGTATCAGTGGTATCTTCCACAGAAAAAAGAACCAAGTTGATGGTGGATCTTATCTGCCTGGTGAGAGTCCTCTTTGAAATTTAATATTT GTAGTTGTTTGTGCAGCTCTTAAATAGCTGAATGTGATAGAGACATGATTTGTGTGTAGTTCAGACTTCATACATTTGGTCGAATTTTATCTTTGTACTC TATTTGAAGAAAAATATTGTGAAGTTTGGGACAAATTTTGTTATGCATCGTGTAAATTTTACCAATCAGAAGATTATAATACTTAGAGCATTATGACATT ATTCGATCCATCTAGCTAACTGCACCCAATAAGATAAAGATTTGGTTGTGGTTGTACTTGGCTTTCACGTCCGGTGGTTTCGTCCAATGCTGTCAAAATC GGACCTGAAGGGAAAATTTGGGAACTAGTCTGAAGTGTAGTTTTGGTTGTCATTATTATTTCCCAAATGAGTTTGACTACATGTATTTATTATTTTGTAC GTCTAAGTTTACCAATTTTCCAATTCCTTGTCTTTATTATTTCTTTTCGTAGGAGCAAAGCTTTGTTGTAGTAATAATAGCTCATTTAAAAAGATGTCGT CAATAGTATAAGTATTGGATATTAAATGTAGACTGAATAGTAAAGGATTAGAGATCACTTGTATTGAGAAATTTGTCAATATTCAATTAATATATACTAA GTAATATAATTATTCTTTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_143942;
• Additional information: details;

Expression of Ll_transcript_366235

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.2
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366235

• Blastp: WEB family protein At5g55860 from Arabidopsis with 57.07% of identity
• Blastx: WEB family protein At5g55860 from Arabidopsis with 50.08% of identity
• Eggnog: protein PLASTID MOVEMENT IMPAIRED(ENOG410Y9HM)
• Kegg: Link to kegg annotations (AT5G55860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447058.1)
• Pfam: Weak chloroplast movement under blue light (PF05701.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;