| Id Trinity | TRINITY_DN46360_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_366663 |
| Sequence | GAACATTCTGATTCGTCGTCTTTACCTTTTGCGTTTCAAAGATTTTTCAGTCTCTGATTTTCAATTTCTGAATTTCTGAACCTTTCATTTCTGGTTTCAC CATCACTTTTGTTTTTTCAATTATTTTCCCTTAACCCTCTTTTGATCTTCATATTCTTCTCAATCATCGAATCAAAATCGAACCAATTTGGGTCTTCTCC ACTTAAAACAGAAATGGGTTTTCTTCTTCTACCCAGATAAGTGTTAATCATGTTACTGTCACTGAACCCACTTCAATAATTGTTCTTAATTTATGTTATT TATGATAAAAAAACAAACTTTAAGCTTTATTCGTTGTATTTAAGGTTGTTTGTTAATTGTTATACTACTTTGTTCAGTGTTGTTTTTTGTTTCATGAATT ATGTTCAAACAAATATTTAGTAAACTTCCTAGAAAGTCATCATCAAAAAGTGGTTCTTCTGATACTAATAGTGGAAGAAGCCATGGTAGTGTTAAAAGCA ATGATCTTGCTACAAAATCGGCGGGTTCGGATTCTGTTTCGCAACCCCATCATGGTAATATTAGCAACAATAGAGCTCAATTACCAATTGCTGTGAATGA AAATCAAAACCCCAATGGGAATTTGAGTTTCAGTTCTTATGAAGCATTGCCTGCATTCAGGGCTGTTCCTAATTCCGAGAAGCAGATATTGTTTATCAAC AAGCTGAAGATGTGTAGTGTCGTGTTTGACTTCGTTGATGCTACGAAGAACATAAAGGAGAAGGAGATTAAGAGGCAGACTTTGGTGGAGCTCGTGGATC ACGTGACTTCGGCTAATGCGAAATTCTCAGAGAGCGCGATACAACAAGTTGTGAGAACGGTGTCCGCGAATATATTTAGGATGCTTAGTCCTCAGCTGCG CGAGAATAAGCCTATTGATGGTGTTGAGTTGGATGAGGAGGAGCCTTCGATGGATCCCGCGTGGCCTCATTTGCAGATTGTGTACGAGCTTTTTCTGCGA TTTGTGGCTTCGCCTGAGCTGGACGTGAAGGTAGCTAAGAGGTTTATTGATCAATCCTTTGTGTTGAGGCTGCTTGATTTGTTTGACTCTGAAGATCCTA GAGAAAGGGAGTACTTGAAAATGACCCTGCACCGAATCTACGGGAAGTTTATGGCGCATCGCCCTTTTATCAGGAAAGCAGTCAATAACATATTTTTTAA TTTTATTTTCGAGACTGAGAAGTATAATGGTATTGCTGAATTCCTTGAAATTCTGGGGAGCATCATTAATGGTTTTGCACTGCCCTTGAAAGAAGAGCAT AAACTGTTTCTTGTTCGGGTGTTGATTCCCCTTCACAAACCAAAAAGCTTGGCAATGTATCATCATCAGTTATCTTATTGCATTACTCAGTTTGTCGAGA AAGACTGCAAGCTTGCTGATACCATTATTAGGGGATTATTGAAGTACTGGCCGATAACAAATAGTTCAAAGGAGGTTATGTTCTTGAGTGAGTTGGAAGA AGTCTTGGAAGCAACTCAGCCACCAGAATTCCAGCGTTGTATGATGCCATTATTTCGCCGAATTGCCCATTGTTTGAATAGCCCTCATTTTCAGGTGGCG GAGAGAGCTTTATTCATGTGGAACAATGACCACATTGTGAACTTAATCAAACAAAATTCCAAAGTGATATTGCCCATTATCTTTCCAGCATTAGAGAGAA ACACCAGAAGTCATTGGAACCAGGCTGTCCATAGTTTGACTTTGAATGTGCGCAAGATTTTCAATGATCTCGATCCGGATGTATCAAAAGAATGCTTGCA AAAGTTTGAGGAAAATGAATCAAAGAAAGATGAAATCAAAGAAGATCGTGAAGCCACTTGGAAACGCTTAGAGGAGCTTGCCATACAGAGAGCCACAAGT AGTGAAGCAATGCTTACTGGTAAACCAATACCCATACGCAACTCTGCAAGTTGAATAGGTGTGGAATATGTATTATGCTGCAATAACTTCATCTTCTTCT TTTCTTTTTTTTTTTTTTTTTTTTTTTTCAGAAGAGTTTTATATTATTTTTTGTTACATGTGATTGGTTGGCCAAGAAGGGCAATTTCTAGAATATTTTC CTTTTCACTGGCTATGATTATTAGCACATCTCACATATGCAAACAAACAACATCCAAAGTTGAGATAGCATAAAACTTGTATTTTTGTAAATGGTACCTA GTGTTGCAACTTTTGCACTTTGGGCACTTTTCATTTTAATGAATTCCTATGAATATTTCCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_144030; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366663
| Blastp | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform from Arabidopsis with 70.69% of identity |
|---|---|
| Blastx | Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform from Arabidopsis with 79.67% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AT3G26020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438323.1) |
| Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) (PF01603.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |