Id Trinity | TRINITY_DN46363_c13_g1_i1 |
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Name Transcript | Ll_transcript_366484 |
Sequence | ATTTTTAGTCCACAATATCAGAATATATTTCAAGTTCAAACCTGTCACATAATAGATTGCAGTTCTAATCTTTTAACATCTTTTGCCACAATTATTTCAG TTGAGGTATTTGCACCCTCTCAATATGATTTTATGTTTTTCATTTTTGTATTCAACGTTATATTCTAAAGAACTACTATCCTGCATGTACTTGCTATCAC ATGATACCTAAATTAATTGCTTAGTTATGATCACCAAAACTTAACGGTAAATAATGCAGTATCTTTCTAAAGAATATAATGAAAACCTTTTATATAAAAG TTATGGCATCTTAATCATTTAGGTTAATGCTGAATTTAATAAATTAAGTTTTTACCCATTTTGAGAAAGAGTGATATTTCATCAACTGTCAGACAATCAG AGGAAGAAATTATTTTTGAAACTATTAGATTTTGTACACATAATAGTATGTATTTCTTTTTAATACTAATTTCCCTTCCTACATCGTTCATGAGTAAGAA TTTTACACACCAAATGTTGACCTCAATCTTGATCTTACTCATGATTGAAGTAAACCTAAGCCATAAAGATGCTTGATGTTTCTATCAGGTACTGTCTTCA AGATGATGACACTTTTTTAATTTTCAGGATTATTAATTAGGTCTGTCAATAAGCTATTGAAAGGAGTAATTTCATAATCTTGTTCTTAATTAATTACATT AGTTTATCCCCTCTTCACGTGTTTTATGTTTATGGGTCTGAGTGAAGTTGGAATTAATTCAAAATTTTCCAGAAAGTTTTAATCATGGGATTCTCCTTTT ATTATGGGTGACATTTACCTCAATTTGCAGGGTATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGA CAGGAACATTGACGACTGGTGGACTTGTGTTCAAGGCAATTGAGCCCATTTATGGTCATCAAATTAGAAACATATCTAATGTTTCTTCCTGCTGCATTCC CACCTGTGAAAAAGAAGCTCTTGCTGTTGCTTCAGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGAC CTCCCATCTGTTTCCATTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACGGCATTCAGTCAGGAACTGGTGGGGATAAAGTAT TGAAAGCAACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGG AAGTGATTTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTAACATTGATTCACCTAGAGGATAGACCTCGTCCGGGGGTTGTTGATGTTATTCAAGAA TTGCAAGAAGCAAAATTTCGTGTGATGATGTTAACTGGTGATCACGAGCCTAGTGCTAGGAGAGTTGCTAGCGCTGTAGGTATCAATGAGTTTTACTGCA ACCTGAAGCCTGAAGATAAACTGAGCCATGTAAAGGACATCGCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGC ACTTGCAGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGCCATCGCTGTTGCAGATGTATTGTTGCTTCGAGAAAATATTTCTGCA GTGCCATTCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCATTATCCTGCATCGTCATGGCTGCTCTTCCATCTG TTTTGGGATATCTTCCTTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTGTGCCTCAATTCGATACGTGGTTTAAATGAACCATCTTG GTCCTGGAATCATGATATATTACAATTGATTAGCTGGGTTAATTCTAGATTACAGTCTCTCAGGACAAATATCAATAGCAAAAGCAGCATCACAACTGCA AATTTGTAAGTTACAGTCATATGAAGTAGAGTATTTTGCTTATCTGTATTCTGTTTATTTCAACAAACAAACCTTAGTTTCATTGCATATGTGTATTTGA TGCTATACATAGTTGGTTCTATTCCCGAATAAAATGTGTAGACTTTGTCAAATCTTTATGATGTACGTTTATCTATCGAGAAAAATGTTAATACCCCTTG TATATCTATAGGCATTTTTCTCATAGCTAATGGAACATTGCCTATTATTTTATGCTAGTCTCCCTATTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_144071; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366484
Blastp | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 77.6% of identity |
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Blastx | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 77.6% of identity |
Eggnog | p-type ATPase(COG2217) |
Kegg | Link to kegg annotations (AT4G37270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434685.1) |
Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |