Id Trinity | TRINITY_DN46363_c13_g1_i2 |
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Name Transcript | Ll_transcript_366485 |
Sequence | CAACCTGAATGGTTCATTTTCACTTAACTCCACTATATACCCCAAATTGAAGGATCAAATCAACAAAACCATACCTCTACGACCAAATCCAATTCCACTT CTCTCTTTTAAACACAACCATGTCCCAAACCTGAAACTCCAATCATCACAAAATGGAACCAATTCCTCATTCAATAATAACCCCTTCCATCAAACCCAAC TCACTTATCATTTACACATCAACTTCAAGATTTCGATCTTCCAACAACATAACTCTCCCTTCTCCGTTACTTTCACTCAAACCCTTCTTTTCCGTTAAAT CTCTCTCTCTCCGTCACCGAACTCTTCGTTTCGTCGCCAAATCCACCACTAGCCACAGAGACCATGACCATCACCATGACCATCATGAACATCATCATGA CCACCATGGACATCATCATGACCATCACCATCACCACCACCACCATCATCATTCGCACGGAATCGACAGTGCGAATCTGACGGGACCACAGAGGGCGGTT ATTGGTTTCGCGAAAGCCAGCAGATGGATGGAGTTGGCTGACTTCCTAAGAGAGCATTTGCATCTTTGCTGCTTTTCAACTGCCTTGTTTGTGACTGCTG CTATTTGTCCTTATGCCTTGCCTAAGCATCTCATCAAACCCTTTCAAAATTCTCTCATTTTCGTTGCGTTTCCTTTCGTTGGGGTTTCTGCTTCACTTGA TGCTCTTATTGAGATTAGTAGTGGAAAAGTGAACATCCATGTGTTAATGGCAATGGCAGCCTTTGCGTCAGTTTTTATGGGAAACGCGTTGGAAGGAGGC TTACTTCTTGCCATGTTTAATCTCGCACATATAGGTGAGCTATTCAGAGTAACATGTTTGGTGAAATTTGCTTTGCAAAGCAAGGTTCAGTCGTTCGCTA TAAGTTTGATTTGCTTAAGTGAATGATTTCTGCAGCTGAGGAGTATTTTACCGGTCGTTCAATGATTGATGTTAAGGAATTGAAGGAAAACAATCCGGAT TTTGCCCTTGTTCTGGATACGATTGATGGTAAACTAGCTAATACCATTGACTTGGCATACAAGAGGGTTCCCGTGCATGATGTGACTGTAGGATCATATG TCTTGGTTGGTGCTGGTGAGACTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTGGTGCCACCATTACCATTGAACACTTGACAGGGGAAGTCAAACCATT GGAGGCCAAAGTTGGAGATAGAATTCCCGGTGGTGCAAGGAACTTAGATGGGCGAATAATTGTTAAGGTAACAAAGACATGGAAGGAATCAACTCTCAAC AGAATTGTGCAGTTGACTGAGGAAGCTCAGATGAATAAACCTAAACTTGAAAGGTGGCTGGATGAATTTGGTGAACGCTACAGCAAAGTTGTTGTGGTGT TATCAGTTGCTATTGCTGTTATCGGTCCACTTGTATTTAAGTGGCCATTCATTAGTACACCCGCTTGCAGAGGCTCTGTTTACCGAGCCCTAGGACTCAT GGTGGCAGCATCACCATGTGCCTTGGCCGTGGCACCATTGGCATATGCTACAGCAATCAGCTCTTGTGCAAGAAAGGGTATATTACTCAAAGGTGGACAT GTTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGACAGGAACATTGACGACTGGTGGACTTGTGTTCAAGGCAATTGAGCCCATTTATG GTCATCAAATTAGAAACATATCTAATGTTTCTTCCTGCTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTTCAGCTATGGAAAAGGGTACTAC TCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTGTTTCCATTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACT GCTACTGTTAACGGCATTCAGTCAGGAACTGGTGGGGATAAAGTATTGAAAGCAACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAG ATGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGATTTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTAACATTGATTCA CCTAGAGGATAGACCTCGTCCGGGGGTTGTTGATGTTATTCAAGAATTGCAAGAAGCAAAATTTCGTGTGATGATGTTAACTGGTGATCACGAGCCTAGT GCTAGGAGAGTTGCTAGCGCTGTAGGTATCAATGAGTTTTACTGCAACCTGAAGCCTGAAGATAAACTGAGCCATGTAAAGGACATCGCAAGAGATATGG GGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTGCAGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGC CATCGCTGTTGCAGATGTATTGTTGCTTCGAGAAAATATTTCTGCAGTGCCATTCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAAT GTGGCTCTGGCATTATCCTGCATCGTCATGGCTGCTCTTCCATCTGTTTTGGGATATCTTCCTTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCC TGCTTGTGTGCCTCAATTCGATACGTGGTTTAAATGAACCATCTTGGTCCTGGAATCATGATATATTACAATTGATTAGCTGGGTTAATTCTAGATTACA GTCTCTCAGGACAAATATCAATAGCAAAAGCAGCATCACAACTGCAAATTTGTAAGTTACAGTCATATGAAGTAGAGTATTTTGCTTATCTGTATTCTGT TTATTTCAACAAACAAACCTTAGTTTCATTGCATATGTGTATTTGATGCTATACATAGTTGGTTCTATTCCCGAATAAAATGTGTAGACTTTGTCAAATC TTTATGATGTACGTTTATCTATCGAGAAAAATGTTAATACCCCTTGTATATCTATAGGCATTTTTCTCATAGCTAATGGAACATTGCCTATTATTTTATG CTAGTCTCCCTATTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_144071; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366485
Blastp | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 78.57% of identity |
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Blastx | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 78.57% of identity |
Eggnog | p-type ATPase(COG2217) |
Kegg | Link to kegg annotations (AT4G37270) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434685.1) |
Pfam | E1-E2 ATPase (PF00122.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |