Ll_transcript_366491

• Id Trinity: TRINITY_DN46363_c13_g1_i8
• Name Transcript: Ll_transcript_366491
• Sequence: CAACCTGAATGGTTCATTTTCACTTAACTCCACTATATACCCCAAATTGAAGGATCAAATCAACAAAACCATACCTCTACGACCAAATCCAATTCCACTT CTCTCTTTTAAACACAACCATGTCCCAAACCTGAAACTCCAATCATCACAAAATGGAACCAATTCCTCATTCAATAATAACCCCTTCCATCAAACCCAAC TCACTTATCATTTACACATCAACTTCAAGATTTCGATCTTCCAACAACATAACTCTCCCTTCTCCGTTACTTTCACTCAAACCCTTCTTTTCCGTTAAAT CTCTCTCTCTCCGTCACCGAACTCTTCGTTTCGTCGCCAAATCCACCACTAGCCACAGAGACCATGACCATCACCATGACCATCATGAACATCATCATGA CCACCATGGACATCATCATGACCATCACCATCACCACCACCACCATCATCATTCGCACGGAATCGACAGTGCGAATCTGACGGGACCACAGAGGGCGGTT ATTGGTTTCGCGAAAGCCAGCAGATGGATGGAGTTGGCTGACTTCCTAAGAGAGCATTTGCATCTTTGCTGCTTTTCAACTGCCTTGTTTGTGACTGCTG CTATTTGTCCTTATGCCTTGCCTAAGCATCTCATCAAACCCTTTCAAAATTCTCTCATTTTCGTTGCGTTTCCTTTCGTTGGGGTTTCTGCTTCACTTGA TGCTCTTATTGAGATTAGTAGTGGAAAAGTGAACATCCATGTGTTAATGGCAATGGCAGCCTTTGCGTCAGTTTTTATGGGAAACGCGTTGGAAGGAGGC TTACTTCTTGCCATGTTTAATCTCGCACATATAGCTGAGGAGTATTTTACCGGTCGTTCAATGATTGATGTTAAGGAATTGAAGGAAAACAATCCGGATT TTGCCCTTGTTCTGGATACGATTGATGGTAAACTAGCTAATACCATTGACTTGGCATACAAGAGGGTTCCCGTGCATGATGTGACTGTAGGATCATATGT CTTGGTTGGTGCTGGTGAGACTGTGCCTGTAGATTGTGAAGTTTTCCAAGGTGGTGCCACCATTACCATTGAACACTTGACAGGGGAAGTCAAACCATTG GAGGCCAAAGTTGGAGATAGAATTCCCGGTGGTGCAAGGAACTTAGATGGGCGAATAATTGTTAAGGTAACAAAGACATGGAAGGAATCAACTCTCAACA GAATTGTGCAGTTGACTGAGGAAGCTCAGATGAATAAACCTAAACTTGAAAGGTGGCTGGATGAATTTGGTGAACGCTACAGCAAAGTTGTTGTGGTGTT ATCAGTTGCTATTGCTGTTATCGGTCCACTTGTATTTAAGTGGCCATTCATTAGTACACCCGCTTGCAGAGGCTCTGTTTACCGAGCCCTAGGACTCATG GTGGCAGCATCACCATGTGCCTTGGCCGTGGCACCATTGGCATATGCTACAGCAATCAGCTCTTGTGCAAGAAAGGGTATATTACTCAAAGGTGGACATG TTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGACAGGAACATTGACGACTGGTGGACTTGTGTTCAAGGCAATTGAGCCCATTTATGG TCATCAAATTAGAAACATATCTAATGTTTCTTCCTGCTGCATTCCCACCTGTGAAAAAGAAGCTCTTGCTGTTGCTTCAGCTATGGAAAAGGGTACTACT CACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCATCTGTTTCCATTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTG CTACTGTTAACGGCATTCAGTCAGGAACTGGTGGGGATAAAGTATTGAAAGCAACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAGA TGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGATTTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTTGTACGGCTAACT ACTCTTATTTTCTTGGTGGATGGATAATACTTTGAGCATTTCAAATTGCAATGACCTCCCCAGCCTGGGAAACTGGCCTCGTATTGAAGTGTTTAAATTC TTCTAGTCTCATTATTTTGAAATAGACAATAATTCCCAAACAAAAACACATTGAACCTGATTATATGATGATATGCCACAAGTCTCATTCTCGTCATTTT TCACTTGAACCTAATTGATAAATCACTTGATGCAGGTAACATTGATTCACCTAGAGGATAGACCTCGTCCGGGGGTTGTTGATGTTATTCAAGAATTGCA AGAAGCAAAATTTCGTGTGATGATGTTAACTGGTGATCACGAGCCTAGTGCTAGGAGAGTTGCTAGCGCTGTAGGTATCAATGAGTTTTACTGCAACCTG AAGCCTGAAGATAAACTGAGCCATGTAAAGGACATCGCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTG CAGCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGCCATCGCTGTTGCAGATGTATTGTTGCTTCGAGAAAATATTTCTGCAGTGCC ATTCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCATTATCCTGCATCGTCATGGCTGCTCTTCCATCTGTTTTG GGATATCTTCCTTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTGTGCCTCAATTCGATACGTGGTTTAAATGAACCATCTTGGTCCT GGAATCATGATATATTACAATTGATTAGCTGGGTTAATTCTAGATTACAGTCTCTCAGGACAAATATCAATAGCAAAAGCAGCATCACAACTGCAAATTT GTAAGTTACAGTCATATGAAGTAGAGTATTTTGCTTATCTGTATTCTGTTTATTTCAACAAACAAACCTTAGTTTCATTGCATATGTGTATTTGATGCTA TACATAGTTGGTTCTATTCCCGAATAAAATGTGTAGACTTTGTCAAATCTTTATGATGTACGTTTATCTATCGAGAAAAATGTTAATACCCCTTGTATAT CTATAGGCATTTTTCTCATAGCTAATGGAACATTGCCTATTATTTTATGCTAGTCTCCCTATTTTTT
• Tissue: pods
• Gene name: LI_gene_144071;
• Additional information: details;

Expression of Ll_transcript_366491

FPKM

• PAB: 0.5
• PNAB: 0.2
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.5
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366491

• Blastp: Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 68.81% of identity
• Blastx: Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 75.78% of identity
• Eggnog: p-type ATPase(COG2217)
• Kegg: Link to kegg annotations (AT4G37270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434684.1)
• Pfam: E1-E2 ATPase (PF00122.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;