Id Trinity | TRINITY_DN46368_c0_g1_i17 |
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Name Transcript | Ll_transcript_365511 |
Sequence | TATAATTATCCGTCCATGGAACGAAAAAGATCACTAAACTTGATATTGCCGAATCATCACTGCGTAACGACTTCTTAAGAACTTAACCTTTACCTTCTCT TCTCTATCTCTTCGCTCTCAATTTTCTCCCTCCAATTTGTTTCATATATCCCTATGACGACGAAGCTGATTAGTTGCGTTATCTTTGATTTGGATGGCAC CCTACTCAACACAGATGGCGTTGTAGGGAATGTTTTAAAGCTTATGTTAAGTAAGTATGGAAAAGAATGGGATGGAAGAGAAACTCTTCAAGTATTAGGG AAAACACCGTTTGAATCTGCTGCTGCTGTTGTTCAACAATATGCTCTTCCTTGCTCAGCCACTGAATTTATTTCTCAGCTTTCTCCTTTGTTCTATGACC AGCAGCGCAACATTAAAGCACTTCCTGGTGCCAATCGGTTGTTAAAACATTTGAAAAGTCATGGAGTTCCAATGGCCCTGGCATCAAACTCTCCAAGGAA AAGCGTAGAGGCCAAATTATCTTATCATGACGGTTGATTTATTTCAGGAACCTTAAACTTTTCGTGCTCCTTCTTTCATTGTTTGTGTGGGTTAACTTAA GTATGAACTTGTTTCTTCTTTTATTTTCTTTGCTCGTAGGATGGAAGAACTCTTTCTCTGTCATAATTGGTGGAGACGAAGTCAGAACAGGGAAACCTTC CCCTGAAATATTCCTTGAAGCTGCTAGGAGGTTAAGTGTGGAGCCTTCCAACTGTCTCGTCATTGAAGACTCTCTACCTGGTGTTACTGCAGGTAAGGCT GCTGGAATGGAAGTGGTTGCTGTACCATCACTTCCAAAGCAGGCGCATCTCTATACTGCAGCAGATGAGGTGATCAGTTCCTTACTTGATTTGCAACTCA AAAATTGGGGTCTACCACCATTTGAAGATTGGGTGGAGGGAACTTTGCCACTAGATCGGTGGCATATAGGTGGGCCTGTCGTCAAGGGTTTTGGTCGTGG GTCAAAGATACTTGGGATACCTACAGCTAATTTGTCGGCCGAGGGGTATTCAGATCTCCTTCAAGAGCATCCTGCTGGAGTTTATTTTGGTTGGGCAGGA TTATCATCAAGAGGTGTTTTTAAAATGGTCATGAGCGTTGGTTGGAATCCATATTTCAACAACAAAGAAAAGACTTTTGAACCATGGCTACTTCATGATT TTAACGAGGATTTCTATGGGGAGGAACTGCGACTTGTTATAGTTGGTTACATACGTCCCGAGGCCAATTTTCCAAGCCTTGAAAGCTTGATAGCTAAGAT TCATGAAGACCGAAGATTTGCTGAGAAAGCTCTTGATCTTCCGTTGTACTCGAGATACAAGAATGATTCATATTTGAGAAGCTCCCAGTCATGATTTTTT AAAGCCCATCCTCTTGTTCAAGCTTGGATTTGGACTGTTATTACTGTTGAGTTCAAAATTCATTTATTATGCCCGAAAAACAGTTTGCCATGTAAATTGT GGATGGAATCTCATGTCCCTAAATATGTCATAAACCATATAACAAGTCAATCAGAATAAAGAAAAAATAAATAAAAATATGAATGTTTAATTTTTTTAAC TGATGTGATATGTTACTATTATGTTGGGACAACATATCTTTGTCCATAAATTGTATCCTATTAATGTAACAATAATCACAATGCAATGTAATTCGGAAC BLAST |
Tissue | pods |
Gene name | LI_gene_144159; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365511
Blastp | Bifunctional riboflavin kinase/FMN phosphatase from Arabidopsis with 78.05% of identity |
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Blastx | Bifunctional riboflavin kinase/FMN phosphatase from Arabidopsis with 78.05% of identity |
Eggnog | riboflavin biosynthesis protein ribF(COG0196) |
Kegg | Link to kegg annotations (AT4G21470) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431450.1) |
Pfam | Haloacid dehalogenase-like hydrolase (PF13419.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |