| Id Trinity | TRINITY_DN46370_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_365433 |
| Sequence | AAATGATAAATTTGACTATTTATATCTTAAAAACACACTATTTTATATTACTCATATGATCACACAAAAATATTTAATAATTATAATTTTTAATCGATAA TTTATAAAAAATTTCGTCCGGTTGATAAACCCTAATTCCCACCATCACCATCTTCAATTCCTTCACTCTCCAATGGAAGAACACTCACAGGAACCGCCGC CGCAGATTCCCCAAACCATCATCTACGATACACTCACTCCCAACTCTCTCTCCGCCGCCACAGTCTCTCAACTTTCCGACCAACCCCAACCCCAACCGGA ACCTAATTCCTACTCCGTTTTCCGCAACGAGATCTCCCTCGACACAATCCAATGTGCTTCTTCCGACATCCCCGCCGTTGATTTCTTCTCCCTCAATGTT TCCGACGAACCTTCCGCCCCGGATTCTCTCCCTGAGCCAGAGGCTCCGCCTGCTGAGGTGTATGAGCCAAAGACTCCGGCTCTCGCGCCCGAGGCGAAGC TCGAGAGTGGTTGGTTTCGTGGGAATTGCAAATTCAAGAGCCCCATGCTTCAGCTACATAAAGAGATAGTGGATTTTAGTAATTTTTTGTTGCCGACCCA AGAAGAGAAAGCTGCACGGGACACAGCAATAGAATCTGTATTTGGGGTTATAAAACACATATGGCCTCATTGCCAGGTCGAAATCTTTGGGTCTTTTCGA ACAGGGCTGTATCTACCAACTAGTGATATCGATGTCGTGATTCTGAAAGCAGGCTTGCCAAATACACAGATGGGTTTGAATGCACTTTCTAGAGCATTGT CACAAAGGGGCATTGCTAAGAAGATACAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAGAAGTGGTTTTTCATTTGATATAAG GTTCAACATTGTTCTTAAAATTTTGTTGCACAAGTTTGTTTATTTCTTCATTGTTATATGCTTACACAAGTTTGTAGTGTTCATGTGCCATCATTTAGTA TGTCTTAGTTTACTGGTCATTTTATTGTCCTTGGTATTGGATGAGTTGTTTAACTTGCTCACCTTTGCAGTTTGCACATGCTATTTATGTTGAATTTTTA TTACAGTTTTCAATATTTCCATAAAATAACTTCCAAATTATAATTAGAAGTGCTGGAGAAGATATGATGGATGCTATTGCTTACTGCTTGGGGAAATGGA AGGACGTTATTTGTCCATATTGTATGCTATGCATGTCTTTAAATTTTTTCGTTGAAGTGATTTTCGGGCTCCATATGAAAGTTATTTTTTGCCCATGGCG TGGTAGATCCGTCTGTCTCTGTCAAGCATCTAAAGTCATCTTTAATCTAAAGTCTTAACAAGGAATCATGAAGGCAACGATATTAGTTATATATTACCAG TTACTACTAACTGTGACAAGTGACAATCAGATTATTCTTAATGTGGTGCTTTGATAGTTGTATAGATGCATGGTTGTCACCTACTCTTTTGTTTTGGATT ATCGTGTTGCCCAATTTTGTGTAGAGTGCAGAACAAAACCTATTTCAATATTAATTTTTGTAATATCATTCGTTCACTGAGGAGTTATGGCCTTGTTTCA GTTTTGACATAGATGGTGGACCCAAAGCTGCTGAGTATATTCAGGAAGCAGTGGCTAAGTGGCCGCAACTACGGCCATTGTGTTTGATTTTGAAAATATT TTTGCAACAAAGAGAACTAAACGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGTCATGCTGTTGGCGGTGTTGCGGAATACCCGTGAGAGT CAAGTTTCTGCAGAGCACAACTTGGGGGTCCTTTTGGTGCATTTTTTTGATTTCTATGGACGCAAATTGAACACCTCAGATGTTGGTGTGTCTTGTAATG GGGCAGGAACTTTTTTCTTAAAGAGCAGTAAAGGGTTTACTGCAAACAAGGGACGTCCATTTCTTATTGGTATTGAGGATCCACAGGTTTTTCCTATAGA ACTGCCTTTTGCTTTCATTAATTTTAAATTACTATTTTACCCATAAAAAGTAAAGCAAGAAGGTAGCTTTTTAAGTGGACTTTTTTGTAACTTATCTCTG GCTCTTACAGCGTTTGTTGGTAAAGTTGGGTCGGGATAACGTGATTCTCTCTGGTTCTCTGCTTAGTTCATTTTAGAGGACTCTCCATTTTTGTACAGAG ATTACAGCTATTCTTGAGCTTCAGATTTTTTTTGTTTTTTATCAGTCTATTTTGAAGGATGTGTCATATCTTTCTTCCCTCATCATTACCTTTATATCTC TCTTTTTCTTATAAAAAAGTTGCGCTGATACTCTTTCCCCCTAGCCATACTTTGCTTGGCCCATCAACTTTTCAAAAGTAATGAATATTCTTAGTTGACA TTTCATTTCTAAAGCCATAATCCATATTTTTTGGGAGCAATTACTCTATAATTTATGTAGTAGTTAAAACTTGAAATATGAGTGTTTGCTTATCACTGCT AAATAAATATCTTAGTGGAGAACTAGAGATTATCTAAGCTGGAGTTTTATCTATATTCTCCATTTTATCAATTAATTGCCTTGCAATTTAGTCTAATATA CAAATTCATATAATATGAAAATGGAATGACATGTATACTATGGACTATGAAGACAAATTTTTATCATGGGTTTGAGTGATTGACAAGAACTTTCTTCTTG GCTGAATTAGGCACCTGACAACGACATTGGGAAGAGTTCCTTTAATTATTTCCAGATTAGATCAGCTTTCGCAATGGCATTCTCAACTTTGACAAATCCC AGGATCATCCTTAGTTTAGGACCCAACAGGAGCATTCTTGGCACTTTAATTAGACCAGACCCTGTCTTGATGGAGCGTAAAGGAGGGTCGAACGGGGAGG TGACTTTTAATAGTCTGCTTCCTGGTGCTGGCGAGCCATTACAACAACAGTATGGAGCACATGATATCCTATGCAATTGGCACATTGATGATGAAGAAGA ACCACTACCACGCGGAATGGATATTTTGACACCCAGCAAACGCTCTTCATCAAAGAAGAGAAAATCTGCATATTATGAAAATTCCAATAATAAGCTAAAG GAAAATGGAGATAGTTGGACCAGGAATGAGAATGGGTCTAGAAAAGAGAGCAGTACAAGGAGGAAAAAAAGAGAGAAGTGGTGACACTTGCTATCTTTAT TAAACCAGAGGGGGCCAGTAGTGGAGTTTGTTACAGACAAAATGGCCACTGTAATTTGATCAGTGGTTTAAAAGTGCAGGAACCAGGCAGCATAAAAGTT GAAGCTAATTTGGAAGTTCAAAACCTTATCACAGACGATCCAAGGTGTGCACTTTGTGTATCAGATCACATCCATGATGTGTTTTTGTTATAGTTGTAAT ATGTCCAATTTTTTTAGAGAATTATCTAACTTTGGAAATCATAGAAGAAACAGGAGTATGTTTTATTGTCAATTTGTCACAATGAGCATGTTATAGTTTA TCTGATTTTGATAGTTTCCTCTTGTTCCCCAATTATCTTCAACATTTGTGGCAACATAGTTATTATGTTTAATAATGAACATTATCATTAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_144162; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365433
| Blastp | Non-canonical poly(A) RNA polymerase protein Trf4-1 from Sophophora with 36.5% of identity |
|---|---|
| Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Homo with 41.55% of identity |
| Eggnog | domain) containing(COG5260) |
| Kegg | Link to kegg annotations (Dmel_CG11265) |
| CantataDB | Link to cantataDB annotations (CNT0000375) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425299.1) |
| Pfam | Nucleotidyltransferase domain (PF01909.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |