Ll_transcript_365438

• Id Trinity: TRINITY_DN46370_c0_g1_i18
• Name Transcript: Ll_transcript_365438
• Sequence: ATAAAATTGAGAAGAGTAACGCTTAAGACTTAACAGTGTTAAAGTGAGATAATATTGTTGTTAATAATGTTTCTCATACCCTTCACTTTATAATTGTGCT TTAAGTGCAAGCCTTCACTTTAGAAAATTAAGTTGTACCGTTAAGATTGTAGAATCTACACCCTACTCGGTACTCTCTTTCTAACTCAGATTCGCCACTT GCGTCACCACTCACCGCTTACATAAACCCTATTAACAACCCCTAAACCCTAATTTCCCCTACCGCCGCCGCCACCACCACCACCGGCACCACCGTCTTCA ATTCCTTCATTCTCCAATGGAAGAAGGCAACCATGAATCGCCGAAGATGCCTCAAACCTTCGTCTACCAAACCCTCAGTCCCATCTCTCTCTCCGCCACC ACAACCGAACCTCCACCCGAACCTGAACCCGACCCCGAACCAGAACCATACTCCGTTTTCATCAATTCGCAACTTTCCGACAATCCCGAACCCGAATCGT ACACCGTTTTGCGGAATGAGATTTCTCATGACACGCTCCAATGCGCTTCTTCTGATATTCCCGTGGTCGATTTCTTCTCCCTCAATGTTGATGATGAACT TGTAGCTGGAGATTCAATCCCCGAGCCGAAGACGCCGGTTACAGTGACGGTTGAGGCAAAGACGCATGTCGTCGTGCCCGAGGCGAAGCTTGAGAGCGGT TGGTTTCGTGGGAATTGTAAATTCAGGAGCCCCATGCTTCAGCTCCATAAAGAGATTGTTGATTTCAGCGAATTTTTGTCGCCGACTCCAGAAGAGAAAG CTGCACGCGACACAGCAATTGAATCTGTATTTGGAGTTATAAGACATATATGGCCCCATTGCCAGGTGGAAGTATTTGGGTCTTTTAAGACAGGGCTGTA TCTACCAACTAGTGATATTGATGTTGTGATTCTTAAAGCAGGCTTGCCAAATCCACAGATGGGCTTGAATGCACTTTCCAGAGCATTGTCACAAAGGGGC ATTGCTAAGAAGATACAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAAAAGTGGTGTTTCATTTGACATAAGTTTTGACATAG ACAATGGACCCAAAGCTGCCGAGTATATTCAGGAAGCAGTGGCTAAGTGGCCGCCACTACGACCATTGTGTTTGATTTTGAAAGTATTTTTGCAACAAAG AGAACTAAATGAGGTATATTCTGGTGGGATTGGTTCGTATGCCCTCCTTGCTATGCTGATGGCATTGCTACGGAATATCCGTGAGAGTCAAGTTTCTGCC GAGCACAACTTGGGGCTCCTTTTGGTGCATTTTTTTGATATCTATGGACGCAAATTGAACACCTCAGATGTGGGTGTATCTTGTAATGGGGCAGGCACTT TTTTCTTAAAGAGCAGTAAAGGGTTTACTTCAAACAAGGGACGACCATACCTTATTGGCATTGAGGATCCACAGGCACCAGACAACGACATTGGGAAGAG CTCTTTTAATTATTTTCAGATTAGGTCAGCTTTTGCAATGGCTTTCACAACATTGACAAATTCCAAGGTCATCCTTAGCTTAGGACCCAACAGAAGCATT CTCGGCACTATAATAAGGCCAGACCCTGTCTTGGTGGAGCGTAAAGGGGGGCTGAACGGGGATGTGACTTTTAGTAGCTTGCTCCCTGGTGCTGGTGAGC CATTACAACAGCAGCACGGAACACAAGATATCTTATGCAATTGGCACGTAGAAGACGAAGAAGAACCACTACCACGGGGAACTGATGGTAGTTCAACGCC TAGCAAAAGCTCTTCCTCAAAGAGGAGGAGGAAATCTGCATCCAAAGAGAATTCCACTAAGAAGTTAAAGGAAAATGGAAGTAGCCGGAAAACCAGGAAT GAAGAGAATGGCTCTACTAGAAAAGAGAATGGTACAAGGAAGAAAAAGAAGAGAAGTAGTGACACTGCTTATATTCAATATACAGCAGACCAATAGTGGA GTTTCTTACAGACAGAATGTTGGGGGCACTGTATCATATGATCAGTGGCTTAAAAGTGCAGGAACCAGGCACAGCATAATGGTTGAGGCTAATTTGGAGT CCAAAATCTTATCAAGTTGTGAGCTTTTATGCATACCCAGAGAGAGGTTGCATTAGTGTATTAATTAAAATAAATCTATGATTTGTTAAATTTCTTTATA CACATTGTTGTTATTGTTGGTTATGTCAAATTTTGTTAGAAAAGAGTGTAAGCTTTATTGTCAGCTGATTTTGATAGTTTCCTGTTTCCTTTTGTCTTAT TCCGAATGAACTTATAAATTAATAAAGAGTCAATCATTCTGCACTCATCACTAGTAGATGTTGATTGTTAGTAC
• Tissue: pods
• Gene name: LI_gene_144162;
• Additional information: details;

Expression of Ll_transcript_365438

FPKM

• PAB: 2
• PNAB: 6.1
• PS1: 5.4
• PS2: 4.7
• PS3: 5
• PW1: 4
• PW2: 5
• PW3: 3.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_365438

• Blastp: Non-canonical poly(A) RNA polymerase PAPD5 from Mus with 37.6% of identity
• Blastx: Non-canonical poly(A) RNA polymerase PAPD5 from Homo with 41.08% of identity
• Eggnog: domain) containing(COG5260)
• Kegg: Link to kegg annotations (214627)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443955.1)
• Pfam: Nucleotidyltransferase domain (PF01909.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;