Id Trinity | TRINITY_DN46370_c0_g1_i8 |
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Name Transcript | Ll_transcript_365428 |
Sequence | AAATGATAAATTTGACTATTTATATCTTAAAAACACACTATTTTATATTACTCATATGATCACACAAAAATATTTAATAATTATAATTTTTAATCGATAA TTTATAAAAAATTTCGTCCGGTTGATAAACCCTAATTCCCACCATCACCATCTTCAATTCCTTCACTCTCCAATGGAAGAACACTCACAGGAACCGCCGC CGCAGATTCCCCAAACCATCATCTACGATACACTCACTCCCAACTCTCTCTCCGCCGCCACAGTCTCTCAACTTTCCGACCAACCCCAACCCCAACCGGA ACCTAATTCCTACTCCGTTTTCCGCAACGAGATCTCCCTCGACACAATCCAATGTGCTTCTTCCGACATCCCCGCCGTTGATTTCTTCTCCCTCAATGTT TCCGACGAACCTTCCGCCCCGGATTCTCTCCCTGAGCCAGAGGCTCCGCCTGCTGAGGTGTATGAGCCAAAGACTCCGGCTCTCGCGCCCGAGGCGAAGC TCGAGAGTGGTTGGTTTCGTGGGAATTGCAAATTCAAGAGCCCCATGCTTCAGCTACATAAAGAGATAGTGGATTTTAGTAATTTTTTGTTGCCGACCCA AGAAGAGAAAGCTGCACGGGACACAGCAATAGAATCTGTATTTGGGGTTATAAAACACATATGGCCTCATTGCCAGGTCGAAATCTTTGGGTCTTTTCGA ACAGGGCTGTATCTACCAACTAGTGATATCGATGTCGTGATTCTGAAAGCAGGCTTGCCAAATACACAGATGGGTTTGAATGCACTTTCTAGAGCATTGT CACAAAGGGGCATTGCTAAGAAGATACAGGTCATTGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAGAAGTGGTTTTTCATTTGATATAAG TTTTGACATAGATGGTGGACCCAAAGCTGCTGAGTATATTCAGGAAGCAGTGGCTAAGTGGCCGCAACTACGGCCATTGTGTTTGATTTTGAAAATATTT TTGCAACAAAGAGAACTAAACGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGTCATGCTGTTGGCGGTGTTGCGGAATACCCGTGAGAGTC AAGTTTCTGCAGAGCACAACTTGGGGGTCCTTTTGGTGCATTTTTTTGATTTCTATGGACGCAAATTGAACACCTCAGATGTTGGTGTGTCTTGTAATGG GGCAGGAACTTTTTTCTTAAAGAGCAGTAAAGGGTTTACTGCAAACAAGGGACGTCCATTTCTTATTGGTATTGAGGATCCACAGGTTTTTCCTATAGAA CTGCCTTTTGCTTTCATTAATTTTAAATTACTATTTTACCCATAAAAAGTAAAGCAAGAAGGTAGCTTTTTAAGTGGACTTTTTTGTAACTTATCTCTGG CTCTTACAGCGTTTGTTGGTAAAGTTGGGTCGGGATAACGTGATTCTCTCTGGTTCTCTGCTTAGTTCATTTTAGAGGACTCTCCATTTTTGTACAGAGA TTACAGCTATTCTTGAGCTTCAGATTTTTTTTGTTTTTTATCAGTCTATTTTGAAGGATGTGTCATATCTTTCTTCCCTCATCATTACCTTTATATCTCT CTTTTTCTTATAAAAAAGTTGCGCTGATACTCTTTCCCCCTAGCCATACTTTGCTTGGCCCATCAACTTTTCAAAAGTAATGAATATTCTTAGTTGACAT TTCATTTCTAAAGCCATAATCCATATTTTTTGGGAGCAATTACTCTATAATTTATGTAGTAGTTAAAACTTGAAATATGAGTGTTTGCTTATCACTGCTA AATAAATATCTTAGTGGAGAACTAGAGATTATCTAAGCTGGAGTTTTATCTATATTCTCCATTTTATCAATTAATTGCCTTGCAATTTAGTCTAATATAC AAATTCATATAATATGAAAATGGAATGACATGTATACTATGGACTATGAAGACAAATTTTTATCATGGGTTTGAGTGATTGACAAGAACTTTCTTCTTGG CTGAATTAGGCACCTGACAACGACATTGGGAAGAGTTCCTTTAATTATTTCCAGATTAGATCAGCTTTCGCAATGGCATTCTCAACTTTGACAAATCCCA GGATCATCCTTAGTTTAGGACCCAACAGGAGCATTCTTGGCACTTTAATTAGACCAGACCCTGTCTTGATGGAGCGTAAAGGAGGGTCGAACGGGGAGGT GACTTTTAATAGTCTGCTTCCTGGTGCTGGCGAGCCATTACAACAACAGTATGGAGCACATGATATCCTATGCAATTGGCACATTGATGATGAAGAAGAA CCACTACCACGCGGAATGGATATTTTGACACCCAGCAAACGCTCTTCATCAAAGAAGAGAAAATCTGCATATTATGAAAATTCCAATAATAAGCTAAAGG AAAATGGAGATAGTTGGACCAGGAATGAGAATGGGTCTAGAAAAGAGAGCAGTACAAGGAGGAAAAAAAGAGAGAAGTGGTGACACTTGCTATCTTTATT AAACCAGAGGGGGCCAGTAGTGGAGTTTGTTACAGACAAAATGGCCACTGTAATTTGATCAGTGGTTTAAAAGTGCAGGAACCAGGCAGCATAAAAGTTG AAGCTAATTTGGAAGTTCAAAACCTTATCACAGACGATCCAAGGTGTGCACTTTGTGTATCAGATCACATCCATGATGTGTTTTTGTTATAGTTGTAATA TGTCCAATTTTTTTAGAGAATTATCTAACTTTGGAAATCATAGAAGAAACAGGAGTATGTTTTATTGTCAATTTGTCACAATGAGCATGTTATAGTTTAT CTGATTTTGATAGTTTCCTCTTGTTCCCCAATTATCTTCAACATTTGTGGCAACATAGTTATTATGTTTAATAATGAACATTATCATTAATT BLAST |
Tissue | pods |
Gene name | LI_gene_144162; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365428
Blastp | Non-canonical poly(A) RNA polymerase PAPD7 from Homo with 43.14% of identity |
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Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Homo with 43.14% of identity |
Eggnog | domain) containing(COG5260) |
Kegg | Link to kegg annotations (11044) |
CantataDB | Link to cantataDB annotations (CNT0000375) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425299.1) |
Pfam | Nucleotidyltransferase domain (PF01909.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |