Ll_transcript_366444

Id TrinityTRINITY_DN46374_c0_g1_i10
Name TranscriptLl_transcript_366444
SequenceTACGAAGGCTGCTCACCCTGAAGCATTTGGAATTGCAGAATGAATTATCATGCATTTCCATCCCTAGACAAAAAAATGTGCAAAAACAAACACATTCACC CATTCCAGCAAATAATAGCTGCATCTCCTCCTTTTTGAGTGGAGTGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGG TCTTTTGCATCTGACAGAGTTACTGTAGTTGCTCGTGGGACAATTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGC GTCTTGTATTTGTTGACAAGTATTATGTTCTAGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATCTCCTTCATCACCACT AAATGTGGTGGATACTGCTTCATCTTCTATAAACTTGGTAAATTCTGTGACTAATGTTTTTGACAAGAGGAGTGACCTTCCTTCCACTCTTCAATTGATT GCCATTCGTCGCATCGGCATTACTCCAGTTTTCTTGGTGCCCCTGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGC ATACTGCAAGACACAGCCTTTCCTATACTTCTATCTCATTTCAGCCATCCACACATGTGACTCCTGTTAGCTCTGTTGATTGTCCAAAAGGAATATTATT TGTTGCAGAGAACAGTTTGCATCTGGTGGAGATGGTGCAGAGCAAGAGACTTAATGTTCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTAT CACAATGAAAGCCGGATGTTGCTTGTGATGAGGACAGAACTCAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTAC TGTCATCTTTTAGACTTGAACTTGGAGAAACAGGGAAATCCATGGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTC TGGTCCAGCCATAATGCCCAATGGTGAAGCTGAGAGTGCCAAGGGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATG ACATTCTGTTCAAAAGCTGGGTCATCATCTCAAAGGACTTCACCATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCA GCAGCCCTGATGACAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGTTTATGCAACTACATGGCAGGGAATGGTACT TGCAATCTGTCCTTATACTGATCATTACTTCTTGGCATCTGCTGGCAATGCCTTCTATTTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTTAGAAGG TATGCTGTGGGAAGGACACGCTTCATGGTAACATCTTTGACTACAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATTATT ACCATGAGGAAGCAAGAAAGTTTGAGCAACTTTACTGTGACCCGTCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTC AGATCGCAAAGGAAGTATTGCTGTTTTATGTACAGAATATTTGGAAGGTAAACCTGAACTAAGTCTTTTGTCTAATCAGGTTCTTGCCAGCCACTTTTTA ATTCCGGGGTTACTGCTTGTGTTTGGAATTTTATTTTCTCTGGTACCAGGATTTTCAAAATTTGAACTATTTGCTTTTATGACAACCAAAACATTCATTG GTGTACTTTGAAATCTGTTAAGAAACATGCCTGTTCATGTTATGCAAATGGACCTTCCCAGTCAGTGGTGGAGTAAATACGTCTCTGTAGTTTATGTTAT GAGAATGGACCTTCGTGGTCACTGGTGTAGTTTGTATATTGTTTCTAGCTTTTTCTACAGCTTGGTGTTAACCTCTTTTCATATTGTGAGTGGACTGCAG TTTTTCTCATAATGGAAGGTCTTTATACTTTATTAGGATGCAATATATTATGACCCGTGTTTCATATTACAACCGTGTTGGTTATAGAATGTTATTTTCA TGCTTAAAGGTTAAAGCTAGTTGCTTATTGATTTCTCACTCACCCTGGTTATTCCTCTGCCTCAGACAGTGCAAGTCATGAAAGCAACTTGATACTAAGC TGTGGTTATTTCATGGCTGAGGTAGCCATGAGCATCCAAAAGGTATATACTTTAAACATCCTGGGAGAACAGTTATTAATTTGCATTAGAAATCATGTCA TAATTTTTTGTAGAATTTTGATTTGAAGCGGGCAGCTTACAGATGAAGTGTGCTGTAATCAATTGCCATAATGACGCAAGTTACTCTGCGAACGAGATGG TATTTATATAGCATGAAATACTACCCCACAAAAAGACCCAGTATAATCCTAAAATACCCCCTGCGGAAAAACCCAACCCAAAACCCCCCTCCATATCCTC CATGCACCTCCGTCACCATGGTGGCTCATAAACCCCAAATGTTGGCCTCCATCATAAAATGACATAAATTGGATGGTGAAATGGTGTTCCGTCTAAAATC CATCACCGCATTCTGCCATGGCCAGACTTTTGACAACACTGCCTAAGAGGGAAGAAGCTAACAAATATTTTTAAAAGAATAAGGGTCCTGTAAAAAGCTC TAAACTATACAGACCTACTTGAAAATTCAGTGAAGCTGTAGGTATCTATTTGAAAATTCAGTGAAACTAAAGGGACAGCCCAAGTATTTTATCCTGTAAC TTTGCAATGTCTTGCGCCTCTTCTTTCTATTCCCTTCACTTGTGTGTTTTAACACGTAGATTTTTTTGTTGGTTAGTGTCATTTATGTTTTTTTTTATCT ATTATTATTTCAGGGCTCATATTCATACAGATTTCCAGCTGATGATGTTTTGCAAGGTGGCAATACTCCCAAGACAAATGTTGACTCAATGATAAATACT GAAAATACTATTATTGCTAGTACTCTGTTAGGAAGCATAATCATCTTCACCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAGGCGGTGCAAGCAAGAC TTGTTGCCCATCATCTGACAGCACCTGTTCTTGGAAATGATCATAATGAGTTTCGTAGCCGTGAAAATCCAGTTGGAGTGCCCAAGATACTCGATGGTGA CATGTTGACCCAGTTTTTGGAGCTAACAAATATCCAGCAACAGATGATTTTGTCTTCTTCAGAGCCACCGAAAACGGTAAAACCAACCTCAAAACCATTC CTACCTCCTCATATTTCGGTCAGCCAGGTAGTTCAACTTCTTGAAAGAGTTCATTATGCACTGAACTAGATACACATTTTGTTCCTCAATCCCCTTTTTT AAACAATGGTATATGGAGAGTGAGATAGCCATAATGGAAAATGAACAACCAGCTACAACAACATGTGAGGACAAATGATCCAAACATTAATTGTCCAAAG CTAACAATCACACATGGGAAGAAGCTTCACAGTCATGGTAAATGTAATTCCAATCTAATGCTGTTTGTTAGTCTTGGATAACAAAGTTGAACTCTTCTTC TGAAACAGATAGTTTCTTGTCTCTGTATTTGTTGTAGTATTCAGAAATTACTATACGGTAGGAAAAGGGCTTTTGGCACAATAAACTGTACAATAGTGAA ATTAGTGAGAGGTTCATTCTTTTTTTAAATAAAAAAAAATAGTAACTATAGTGTATATTCAATAAATATAATATTTTTGTGTGATCTTTTGACCTCTTGA TGCTTTTTTCTTAC BLAST
Tissuepods
Gene nameLI_gene_144192; 
Additional informationdetails; 

Expression of Ll_transcript_366444

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_366444

BlastpPre-mRNA-splicing factor prp12 from Schizosaccharomyces with 22.62% of identity
BlastxSplicing factor 3B subunit 3 from Mus with 28.21% of identity
Eggnog-
KeggLink to kegg annotations (SPAPJ698.03c)
CantataDBLink to cantataDB annotations (CNT0000034)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019444143.1)
PfamCPSF A subunit region (PF03178.14)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;