Ll_transcript_366437

• Id Trinity: TRINITY_DN46374_c0_g1_i6
• Name Transcript: Ll_transcript_366437
• Sequence: TACGAAGGCTGCTCACCCTGAAGCATTTGGAATTGCAGAATGAATTATCATGCATTTCCATCCCTAGACAAAAAAATGTGCAAAAACAAACACATTCACC CATTCCAGCAAATAATAGCTGCATCTCCTCCTTTTTGAGTGGAGTGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGG TCTTTTGCATCTGACAGAGTTACTGTAGTTGCTCGTGGGACAATTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGC GTCTTGTATTTGTTGACAAGTATTATGTTCTAGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATCTCCTTCATCACCACT AAATGTGGTGGATACTGCTTCATCTTCTATAAACTTGGTAAATTCTGTGACTAATGTTTTTGACAAGAGGAGTGACCTTCCTTCCACTCTTCAATTGATT GCCATTCGTCGCATCGGCATTACTCCAGTTTTCTTGGTGCCCCTGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGC ATACTGCAAGACACAGCCTTTCCTATACTTCTATCTCATTTCAGCCATCCACACATGTGACTCCTGTTAGCTCTGTTGATTGTCCAAAAGGAATATTATT TGTTGCAGAGAACAGTTTGCATCTGGTGGAGATGGTGCAGAGCAAGAGACTTAATGTTCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTAT CACAATGAAAGCCGGATGTTGCTTGTGATGAGGACAGAACTCAATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTAC TGTCATCTTTTAGACTTGAACTTGGAGAAACAGGGAAATCCATGGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTC TGGTCCAGCCATAATGCCCAATGGTGAAGCTGAGAGTGCCAAGGGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATG ACATTCTGTTCAAAAGCTGGGTCATCATCTCAAAGGACTTCACCATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCA GCAGCCCTGATGACAATAGTTCTGATGGCATCAAACTTGATGAAAATGAAGTATGGCAGTTTCGATTGGTTTATGCAACTACATGGCAGGGAATGGTACT TGCAATCTGTCCTTATACTGATCATTACTTCTTGGCATCTGCTGGCAATGCCTTCTATTTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTTAGAAGG TATGCTGTGGGAAGGACACGCTTCATGGTAACATCTTTGACTACAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATTATT ACCATGAGGAAGCAAGAAAGTTTGAGCAACTTTACTGTGACCCGTCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTC AGATCGCAAAGGAAGTATTGCTGTTTTATGTACAGAATATTTGGAAGACAGTGCAAGTCATGAAAGCAACTTGATACTAAGCTGTGGTTATTTCATGGCT GAGGTAGCCATGAGCATCCAAAAGGGCTCATATTCATACAGATTTCCAGCTGATGATGTTTTGCAAGGTGGCAATACTCCCAAGACAAATGTTGACTCAA TGATAAATACTGAAAATACTATTATTGCTAGTACTCTGTTAGGAAGCATAATCATCTTCACCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAGGCGGT GCAAGCAAGACTTGTTGCCCATCATCTGACAGCACCTGTTCTTGGAAATGATCATAATGAGTTTCGTAGCCGTGAAAATCCAGTTGGAGTGCCCAAGATA CTCGATGGTGACATGTTGACCCAGTTTTTGGAGCTAACAAATATCCAGCAACAGATGATTTTGTCTTCTTCAGAGCCACCGAAAACGGTAAAACCAACCT CAAAACCATTCCTACCTCCTCATATTTCGGTCAGCCAGGTAGTTCAACTTCTTGAAAGAGTTCATTATGCACTGAACTAGATACACATTTTGTTCCTCAA TCCCCTTTTTTAAACAATGGTATATGGAGAGTGAGATAGCCATAATGGAAAATGAACAACCAGCTACAACAACATGTGAGGACAAATGATCCAAACATTA ATTGTCCAAAGCTAACAATCACACATGGGAAGAAGCTTCACAGTCATGGTAAATGTAATTCCAATCTAATGCTGTTTGTTAGTCTTGGATAACAAAGTTG AACTCTTCTTCTGAAACAGATAGTTTCTTGTCTCTGTATTTGTTGTAGTATTCAGAAATTACTATACGGTAGGAAAAGGGCTTTTGGCACAATAAACTGT ACAATAGTGAAATTAGTGAGAGGTTCATTCTTTTTTTAAATAAAAAAAAATAGTAACTATAGTGTATATTCAATAAATATAATATTTTTGTGTGATCTTT TGACCTCTTGATGCTTTTTTCTTAC
• Tissue: pods
• Gene name: LI_gene_144192;
• Additional information: details;

Expression of Ll_transcript_366437

FPKM

• PAB: 1.5
• PNAB: 3
• PS1: 2.3
• PS2: 1.7
• PS3: 2.7
• PW1: 3
• PW2: 2.4
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366437

• Blastp: Pre-mRNA-splicing factor prp12 from Schizosaccharomyces with 22.64% of identity
• Blastx: Pre-mRNA-splicing factor prp12 from Schizosaccharomyces with 21.81% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPAPJ698.03c)
• CantataDB: Link to cantataDB annotations (CNT0000034)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444144.1)
• Pfam: CPSF A subunit region (PF03178.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;