| Id Trinity | TRINITY_DN46374_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_366440 |
| Sequence | GTTGGAAAGCACAATGTTCTAAATAATTACTAACATTAATAAGATTAAGAACCATTTAGTATTCCAATGGCACCATAATTCATCATTACCAATTTTTTAT ATTCCTATTTTACCCCTCAACTTCCACTCTTCTTCATTTCAAAAAACCTAACTCAAAACTCAAAACTCAAAACTCAAAGCTCAAAAATCTCTCTCTGTCA ATGGCGGTTTCCGAAGAAGAGTGTTCTTCCACTAAGCGCGGTGGTGGTGGTGGCGCTGCTGCTCGCTCTTTCTCTTCTTCTTCATCTGCCAGACGCTATT ACCTTTCCAAGTGCGTTCTCAGAGGAAGCGTTGTTCTTCAACTCCTTTACGGTCATATTCGTTCACCTACCTCAAACGACGTCGTTTTTGCTAAGGAGAC ATCTATAGAATTGGCAGTGATTGGTGAGGATGGAGATGTACATTCGGTTTGTGATCAGCCTGTTTTTGGCACCATTAAGGATCTTGCCATATTGCCCTGG AATGACAAATTTTGTGCCCGTGACCCACAGATGTGGGGTAAAGACCTTTTGGTTGCTCTATCTGATTCAGGGAAACTTTCGTTGCTCACGTTTTGCAATG AAATGCACAGGTTTTTTCCCATAACACATGTTGAACTATCTAATCCTGGAAACCCAAGAGATCTTCCTGGAAGGATGTTAGCAATTGATTCCAGTGGTTG TTTTATTGCTGCCAGTGCATATGAAGATCGGCTGGTTCTCTTTTCGATGTCAATGACTGGCAATGATATAATTGATGAGAGAATAACATATCCTTCTGAA GGGGAAGGCACTGCAGGTACTTCCAGAAGCATCCAGAGAACCAGTATACGTGGTACTATTTGGAGCATGTGCTTTATTTCACAAAATTCCAGACAACCAA GCAAGGAACATAATCCTTTACTAGCTGTTATTCTAAATAGGAAGGGATCGCTTCTAAATGAATTGCTGTTATTGGAATGGAATATTAAAGCACGTACAAT CTTTGTTATTTCCCTGTATGTTGAAGCTGGGCCCCTAGCACATGACATTGTTGAAGTTCCTAATTCTTGTGGACTTGCATTTCTATTCAGGGCTGGTGAT GCTCTCTTAATGGATTTTAGAGATCCTCACAATCCGTGTTGTGTCTATAGGACTAGCTTAAACTTTTTACCTAATGTCGTGGAAGAGCAGACTTATGTTG AAGACTCTTGTAAATTACACGATATTGATGATGAACGCTTCAATGTTGCTGCCTGTGCCTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAG TGACAATGGCAGTACAAGTTCAAGTTATAAGTACGTATGCTCATGGTGTTGGGAACCTGAAAATGGAAAAGATCCTAGGATGATCTTCTGTATAGATAGT GGAGAATTTTTTATGATTGAAATTCATTTTGATCCTGATGACCTTAATGTGAATCTCTCCGAGTGTCTCTACAAAGGTCTACCCTGTAAAGCACTTTTAT GGGTTGAAGGCGGATATCTGGCTGCTCTTGTAGAAATGGGAGATGGCATGCTCCTGAAATTGGTAGATGGAAGGCTTTGTCATTCAAACCCTATTCAAAA CATTGCACCAATCTTGGATATGACAGTTGTGGATTATCATGATGAGAGGCATGATCAAATGTTTGCTTGCTGTGGCGTGGCACCTGAGGGTTCATTAAGG ATTATTCGGAGTGGTATTAGTGTAGAAAAGCTACTTAGGACTGCTCCTATATATCAAGGTGTAACTGGTACTTGGACAGTTCGAATGAAAGTTGCTGATT CATATCATTCTTTCCTAGTTCTGTCGTTTGTTGAGGAGACCAGGATATTGTCAGTTGGCTTAAGTTTTACTGACGTGACTGATTCTGTTGGTTTCCATCC TAATGTATGTACTTTGGCATGTGGCCTTGTGAGTGATGGTTTGCTTGTTCAGATCCACCAATCCACTGTTAGGCTTTGTTTGCCTACGAAGGCTGCTCAC CCTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCCCCAGACAATGTGAATATCAGTTTAGGGGTGGTTGGGCATAACTTTGTTGTTGTAT CAACATCTAACCCATCATTTTTGTTTATCCTTGGGGTTAGATTGCTATCAGCTTCTCATTATGAAATTTATGAAATGCAGCATTTGGAATTGCAGAATGA ATTATCATGCATTTCCATCCCTAGACAAAAAAATGTGCAAAAACAAACACATTCACCCATTCCAGCAAATAATAGCTGCATCTCCTCCTTTTTGAGTGGA GTGGACAACAATAAGACATTTATTATTGGCACACATAAGCCTTCTGTGGAAATTTGGTCTTTTGCATCTGACAGAGTTACTGTAGTTGCTCGTGGGACAA TTTCATTAACAAATACTATGGGAACTGCTATAACTGGGTGTGTACCCCAAGATGTGCGTCTTGTATTTGTTGACAAGTATTATGTTCTAGCTGGATTGAG GAATGGAATGCTCCTTCGCTTTGAGTGGCCGGCAGAACCATCTCCTTCATCACCACTAAATGTGGTGGATACTGCTTCATCTTCTATAAACTTGGTAAAT TCTGTGACTAATGTTTTTGACAAGAGGAGTGACCTTCCTTCCACTCTTCAATTGATTGCCATTCGTCGCATCGGCATTACTCCAGTTTTCTTGGTGCCCC TGGGTGACACACTTGATGCTGATATAATTGCTCTGAGTGATAGACCTTGGTTGTTGCATACTGCAAGACACAGCCTTTCCTATACTTCTATCTCATTTCA GCCATCCACACATGTGACTCCTGTTAGCTCTGTTGATTGTCCAAAAGGAATATTATTTGTTGCAGAGAACAGTTTGCATCTGGTGGAGATGGTGCAGAGC AAGAGACTTAATGTTCAGAAGTTTCATTTAGAGGGCACTCCACGGAAGGTCCTGTATCACAATGAAAGCCGGATGTTGCTTGTGATGAGGACAGAACTCA ATTGTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCTTAAGTGGGTCAGTACTGTCATCTTTTAGACTTGAACTTGGAGAAACAGGGAAATCCAT GGAATTAATAAGAGTTGGAAGTGAGCAGGTGCTTGTAGTTGGAACTAGTCTGTCTTCTGGTCCAGCCATAATGCCCAATGGTGAAGCTGAGAGTGCCAAG GGTCGTCTTCTTGTTCTCTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTCTGTTCAAAAGCTGGGTCATCATCTCAAAGGACTTCAC CATTCCATGAAATTGTTGCATATGCTCCTGAGCAGCTTTCAAGCAGCAGTCTTGGCAGCAGCCCTGATGACAATAGTTCTGATGGCATCAAACTTGATGA AAATGAAGTATGGCAGTTTCGATTGGTTTATGCAACTACATGGCAGGGAATGGTACTTGCAATCTGTCCTTATACTGATCATTACTTCTTGGCATCTGCT GGCAATGCCTTCTATTTATGTGGTTTCCCAAGTGACCATCCCCTAAGAGTTAGAAGGTATGCTGTGGGAAGGACACGCTTCATGGTAACATCTTTGACTA CAGATTCTACTAGAATTGCAGTTGGTGATTGCCGTGATGGTATCCTTTTCTATTATTACCATGAGGAAGCAAGAAAGTTTGAGCAACTTTACTGTGACCC GTCACAGAGGTTAGTTGCTGATTGCATTCTTATGGATACTGAAACAGCAGTTGTTTCAGATCGCAAAGGAAGTATTGCTGTTTTATGTACAGAATATTTG GAAGGTAAACCTGAACTAAGTCTTTTGTCTAATCAGGTTCTTGCCAGCCACTTTTTAATTCCGGGGTTACTGCTTGTGTTTGGAATTTTATTTTCTCTGG TACCAGGATTTTCAAAATTTGAACTATTTGCTTTTATGACAACCAAAACATTCATTGGTGTACTTTGAAATCTGTTAAGAAACATGCCTGTTCATGTTAT GCAAATGGACCTTCCCAGTCAGTGGTGGAGTAAATACGTCTCTGTAGTTTATGTTATGAGAATGGACCTTCGTGGTCACTGGTGTAGTTTGTATATTGTT TCTAGCTTTTTCTACAGCTTGGTGTTAACCTCTTTTCATATTGTGAGTGGACTGCAGTTTTTCTCATAATGGAAGGTCTTTATACTTTATTAGGATGCAA TATATTATGACCCGTGTTTCATATTACAACCGTGTTGGTTATAGAATGTTATTTTCATGCTTAAAGGTTAAAGCTAGTTGCTTATTGATTTCTCACTCAC CCTGGTTATTCCTCTGCCTCAGACAGTGCAAGTCATGAAAGCAACTTGATACTAAGCTGTGGTTATTTCATGGCTGAGGTAGCCATGAGCATCCAAAAGG TATATACTTTAAACATCCTGGGAGAACAGTTATTAATTTGCATTAGAAATCATGTCATAATTTTTTGTAGAATTTTGATTTGAAGCGGGCAGCTTACAGA TGAAGTGTGCTGTAATCAATTGCCATAATGACGCAAGTTACTCTGCGAACGAGATGGTATTTATATAGCATGAAATACTACCCCACAAAAAGACCCAGTA TAATCCTAAAATACCCCCTGCGGAAAAACCCAACCCAAAACCCCCCTCCATATCCTCCATGCACCTCCGTCACCATGGTGGCTCATAAACCCCAAATGTT GGCCTCCATCATAAAATGACATAAATTGGATGGTGAAATGGTGTTCCGTCTAAAATCCATCACCGCATTCTGCCATGGCCAGACTTTTGACAACACTGCC TAAGAGGGAAGAAGCTAACAAATATTTTTAAAAGAATAAGGGTCCTGTAAAAAGCTCTAAACTATACAGACCTACTTGAAAATTCAGTGAAGCTGTAGGT ATCTATTTGAAAATTCAGTGAAACTAAAGGGACAGCCCAAGTATTTTATCCTGTAACTTTGCAATGTCTTGCGCCTCTTCTTTCTATTCCCTTCACTTGT GTGTTTTAACACGTAGATTTTTTTGTTGGTTAGTGTCATTTATGTTTTTTTTTATCTATTATTATTTCAGGGCTCATATTCATACAGATTTCCAGCTGAT GATGTTTTGCAAGGTGGCAATACTCCCAAGACAAATGTTGACTCAATGATAAATACTGAAAATACTATTATTGCTAGTACTCTGTTAGGAAGCATAATCA TCTTCACCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAGGCGGTGCAAGCAAGACTTGTTGCCCATCATCTGACAGCACCTGTTCTTGGAAATGATCA TAATGAGTTTCGTAGCCGTGAAAATCCAGTTGGAGTGCCCAAGATACTCGATGGTGACATGTTGACCCAGTTTTTGGAGCTAACAAATATCCAGCAACAG ATGATTTTGTCTTCTTCAGAGCCACCGAAAACGGTAAAACCAACCTCAAAACCATTCCTACCTCCTCATATTTCGGTCAGCCAGGTAGTTCAACTTCTTG AAAGAGTTCATTATGCACTGAACTAGATACACATTTTGTTCCTCAATCCCCTTTTTTAAACAATGGTATATGGAGAGTGAGATAGCCATAATGGAAAATG AACAACCAGCTACAACAACATGTGAGGACAAATGATCCAAACATTAATTGTCCAAAGCTAACAATCACACATGGGAAGAAGCTTCACAGTCATGGTAAAT GTAATTCCAATCTAATGCTGTTTGTTAGTCTTGGATAACAAAGTTGAACTCTTCTTCTGAAACAGATAGTTTCTTGTCTCTGTATTTGTTGTAGTATTCA GAAATTACTATACGGTAGGAAAAGGGCTTTTGGCACAATAAACTGTACAATAGTGAAATTAGTGAGAGGTTCATTCTTTTTTTAAATAAAAAAAAATAGT AACTATAGTGTATATTCAATAAATATAATATTTTTGTGTGATCTTTTGACCTCTTGATGCTTTTTTCTTAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_144192; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366440
| Blastp | DNA damage-binding protein 1b from Arabidopsis with 22.66% of identity |
|---|---|
| Blastx | DNA damage-binding protein 1 from Gallus with 22.42% of identity |
| Eggnog | DNA- binding protein(ENOG410XPF6) |
| Kegg | Link to kegg annotations (AT4G21100) |
| CantataDB | Link to cantataDB annotations (CNT0000034) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019444144.1) |
| Pfam | Mono-functional DNA-alkylating methyl methanesulfonate N-term (PF10433.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |