Ll_transcript_364869

• Id Trinity: TRINITY_DN46381_c0_g1_i1
• Name Transcript: Ll_transcript_364869
• Sequence: TTTGCAAGACGGGGAGCATGAAAAGCAACGGAGGCATTTTCTCTATTTCCTCCTTCATCAAGTGCCAGTGAGCAGTAACTTCAGCATTCTAATAAGAAAG TTGTCATGCCAGATAGCGCTTCTTGTTGTACACCGAGGATACAAGATGAACCCACCTTGCCCACCTTCTGAGTGTGCACATATGTGGGGACCTGCCCTCG TGAAATCTCTGAAGGACTCCTCGCTTCACAATTCTTTGAGGCAACCTGCTTTTGACCTTATACAGACTATCATAGTATCGGATGCTACTGCTTTAATTTA TTCGGTGCTGAATTGCTGCACAACTCCAACCATTGGTAATAGCATGGCATATGAGGTCATTGAGTTGGATGATGAAAATGATGATACTTGGCTGCCATCT ATTCCTGATGGTGAAGAGAAGGATAGTAGTAGTTCTTGGAGTGAATTCAGTGTGCAGAGTGTAATAACATCTCGAGAGTGCCGAGAATGGATGTGCATTC CAATGCTATGGTTTGATGTTTTAGTTGATATCAATCCCTCAGTCCTTCCAGTATCATTTTCCAAGGCTGTTTTCTGGGCACGATCTCGTTTTCCTATGGT AGAACTTGAGAATAGTGCAGAAACAGTGCTTCCAGTCAGATCTTACCTATCATCTTATGCTGCAGAAATTTCCTCTTCATTTGGCTGGAAGGTTCCAACT GGAGCTGATGATGGTGGAGGGAACAAATCAAATAACTCAGTTGAAGTGTTGACTATGTCTTCTCCTTTAATAAGAACATTTAACAGGTTAACTGCACATT TTTTAGCTCAGATGGGACAAGGAGAGCTTCGAAGTCAGTGGACTTGGGAACCATTAATGAGTGAAAGCTTGATCCTTTCGCTTTTGGATCCAAATGATGA TGTTAGGCAGTTTGGAAAGTCTATGTTGGAACAAATTTCAGATACCCGTGGTCTTTCATATGGATTGAAGTTTCTTTATTCTCACAAACTCTCATTGTAT GCAACTATGTTAGGCCTCAAACATGCTTTGAAACTGGTCCAATTGGATTCTGTTCTGTTGAAGTTTCATGCTCTACATCATTTTTGGTTTCTTTTATGCA AATTACTAAAAGATGGGGATCCACCTGCTTCAGAGTCGCTTGAAAATACACATGGTGGAAAGGTGCCGGAATTCTCTTCACAAGGCGGGTTTCTCAAGCA GCCGGCTTTTGATTCTCTACCTCTGGGTATTGATAAACAAGTTTCTGATGCTGAAAAAAAAACAAAGGAGAAATTTTGTTGCTTAATATCTGAAATGGCA TGGCCTATTTTTTGTATGTGCCTTGTAAAAGGAAAGGAGTTTATTGATTTCAATTTTTGCCAGATGACTTGTGTTCGGTTACTCGAGATTCTCCCTGTTC TTGTTGATAAGCTCCATCTATTTGTTGGTAAAGAGCTTGTGAATTTCACAATGCTGGTAAAAAAGAAGTTGGATTTCAAATGGCTTCATGATCTCATAGA ATGGAGAAAGTCATCACTTGAAGTTGTTATTGTTTATTGGAAGCGAGCAGTTACTTATTTACTGAACCTGTTCAAGGGTTCTTGTGATAAAAGTTCTGTG TCGATAATCGCGACCATTGAGAATATTATTTCAAGTGATGGCTATCCTTTAGAAGAATTGGCGGAACAAGTGTCTCGCCTGTCTGTTTCTTTATCTGGGG AAGATTCTCGTAATTTTCAGGAGGCAAATATGAAACCCAAGTCATCAGTATCTGAAAGGTTGTATTTTGAGAAGAACTGTTTTACTTCAGATATGCGTTT TTCATCCGTTGAGGATAAAGGAGTACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAGTTATTCTTTTAGATGATGAAGAG GATCCAATTGAGGATAAAGGAGTACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAATTCTTTTAGATGATGAGGAGGATC CAAATGAATTTCCTATGGTCATTTTATCAGATATTAAGACAGGCCGCCACATGTCTGATGGCAAGTCAATGTCCTGTGATGCGGGTAAAACTTCACCAGC TTCTGGCCTTGCAAAACAGAATGTTTCTTACTTGAAAACTTCCAAGGAAATGGAGTCAACCTCCCAGAAAAAGGCAACTAGTGATGATTTCAAAATTTCT TCTCAGAAACCGGACTCTGGTAATATGCACGATAAACCTGTTATCCCTTCGTTTACCAATTCCAAAGAAAGCCTAGGCATTCGTAACAGCAAAGAAACTA GCTCAAAATCTGGCGATAGGGTGAATTTGTCAAATTTTTCTGATGAGTATAATAATGCTAAAAATTTTAAGAAAGCTTGCAGCATTGCCACTTCTAAAGC TGGTGTCTCAAGCAATATTAGTAAAACGTCAAGTGAGTTTCAGGAGGCTGTAGTTAATCGGGTAGAGACTGCTCTGAAATCTGTGGGATGTGTCCAGTTG CATGCACCAAAGCCTACTTCCGTTTTAAGAAGGCAAGTTATTCAACTCAAAACACCTTTTGAAAACAGATCCAACTCTCTCCGTAAAGTAGAGGACCCAT TGAAAAGATTCAAGCCACCAAGGTTGGATGATTGGTATAAACCTATTCTTGAAATAAATTATTTTGTGACAGTGGGGTTGTCATCCCAAAGAAAAGATGA AAACCAAACTGTTAGCAAATTAAAAGAAGTTCCTGTACATTTTCAATCACCTGAGCAGTATGTGGAGATATTTCGGCCATTGGTTTTGGAGGAGTTTAGA GCACAGCTACAAAATTCTTTTATTGAGATGTCCTCATGGGAGGAGATGTTTTATGGAAGCCTTTCTGTGATGTCAGTGGAGAGAATTGATGATTTTCATC TTGTTCGTTTTGTCCATGATGATGGTGATTCTGCAACGGGTAAGAGCTTTTCAGAAAATGATCTTCTTTTGCTAACAAAAGATCCTCCACAAAAAACGTC TCAAGATGTTCATATGGTTGGAAAGGTTGAAAGGCGTGAGAAAGGCAATAAAAGAAGTTTAAATATTGTTCTTATCAAGTTCTATTTTCAAAATGGCTCT TCACGTTTAAATCAAGCTAGGAGGAATCTCAATGAACGGAGTAAATGGCATGCATGCCGTATAATGAGCATTACCTCACATATTCGGGAGTTTCAGGCAT TGTCATCAGTAAAAGCTATCCCCTTACTCCCGCTCATTTTAAATCCTGTGAAGGATTCCATTCATCTTAATGGCTCTAAAGAAGTAGATCTCATCAAGTT GAGCCAGCCATTGCAGCAAACTCTGAGGTCGTCATTTAATGTCTGTCAGCTTCAAGCAATTAGTGTTGCTATTGGAAGGGCTAAACCAAAGAAAAATGTT GAATTATCTCTTATTCAGGGTCCTCCAGGAACTGGGAAAACACGAACTATCGTTGCAATTGTCAGTGCCCTTCTAGCTGCTCCTTCACAGAAGGTGAATT GTCTAAAAAATATTTCAGATGAAAATTTGAACCGTCATTCTTTATCTTCCTCTTCAAGACCAAAGATTAGCCAGAGTGCTGCTATTGCAAGGGCATGGCA GGATGCAGCCTTGGCTAGACAATTGAGTGATGATGTCCAAAGTTCATCAAAATCTTTTGGAAATTGTGTGAAACAAAGAGTTCTTATCTGTGCTCAATCT AATGCTGCAGTGGATGAGTTGGTGTCAAGAATTTCTAGCCATGGTCTCTATGGCAATGATGGGAAAATGTACAAGCCCTATCTTGTGCGGGTTGGAAATG TAAAAACTGTCCATCCGAATTCATTGCCATTCTTTATTGATACTCTTGTTGACCAACGTGTTGCAGAAGAGAGGATGCATGTGCATGATGGGAAGAATGA CTCGAGGGTAGATTCTTCAGTGGTGCTGCGGTCTAATTTAGAGAAATTAGTTGATTCTATTAGATTCTATGAAGCTAAACGTGCCAACTTAATGGATGGA AATGCTAATGTTAAAACTCATCTTCATGATGACTCTCACTTGGAGGATGAGAAGGAATTGTCTGATGCAGAAATTGAATTGAAGTTACGTAAATTCCATG AACAGAAAAGACAAATATATAAAGATCTTACTAATGTTCAGGCTCAAGAGAAAAAAGCCAATGATGAAACCTGGAATCTTAGAAATAAGCTGCGGAAATC TATATTGAGGGAAGCTGAAATAGTAGTAACTACATTAAGTGGTTGTGGTGGGGACCTTTTTGGAGTTTGCTCTGAAACAATGTTAAGTTCCAAGTTTGGG GGTCCATCTGAACATACTCTGTTTGACGCTGTTGTAATTGATGAAGCTTCCCAAGCTCTTGAACCTGCTACTCTGATTCCTCTTCAGCTTTTAAAGTCAA TTGGAACCAAATGCATTATGGTTGGTGATCCAAAGCAGCTGCCTGCAACTGTCATCTCAAATGTTGCTAGTAAATTTCTTTATGAATGCAGTATGTTTGA ACGTTTACAAAGGGCTGGGCATCCTGTGATTATGCTTACTGAACAGTATAGAATGCATCCAGATATATGCAAGTTTCCTTCATTGCATTTTTATGACAAT AAGTTACTGAATGGCTGCCAAATGTCGAGCAAATCAGCACCATTTCATCAGACCAAGGGTCTCGGACCTTATGTATTCTATGATGTCATTGACGGTCTGG AAGTTCATGGGAAAAACTCTGGTGGAATGTCGCTTTGTAATGAGCATGAGGCTGATGCTGCAGTTGAAGTACTAAGGTTTCTCAAGAGAAGGTACCCAAC TGAATATAATGGTTGTAGAATTGGTGTTATTACTCCATACAAGTGTCAACTTTCTCTTCTGAGATCTCATTTTCTTCATGCATTTGGATCTTCGAACGTA TCTGAAATTGAATTTAATACTGTGGATGGTTTCCAAGGTCGAGAGGTGGATATTTTGTTACTATCTACTGTAAGAGCTACTCATTCAACCACTGCTGCAT CTGAAGTCAAATCCAGCACTATTGGATTTGTTGCTGATGTAAGACGGATGAATGTTGCCTTGACAAGGGCCAAATTATCACTTTGGATTTTTGGTAATGC AAGGACATTACAGACAAACCCTGACTGGGCTGCTCTTCTGAAGGATGCTAAAGAAAGAAACATGATCATATCAGCTAAGATGCCATATCATTCAATATTT AAAACAGCTGAAAATAAGTGCCGTGTTCAAAATCCCGATAAGCATGTAAGACCATTACAGCATGAGAAAAAGGCTAAGGATAGTTGCCAGAACGGAGCAA AAAAATTGGGTAATGACAAGTGTACTTTTGAGAGAAAAAGGAAATGCATTTCTTCTGACGTCAAGGACAGGAATAAGGGTAATAGAGATGAGAGAGCTAT TTCACCTTTAGGAAAAGATGTTCCATTTCAGGGAAGCAATTCCGAAGAACATATTTCCATCAAGGACACAGCATATCTTGTTGCAACACATGAAAACAGA AGCTCCTGTTATCAACAGGTTAGTAACAGTGGAAGAGAATGCAGGGATAAAATGAAAAATTCGGGTAGGACAACATTGGGTAAGAGGCTGTCAAAATTTC AGAATTCAGGAAATAATTTAGACCATTCAGTGGAAGAGACAGATGATAGGCATAAGGCATCAAAACCTGAGTCAAAAAGACCAACTATGTGTTCTGGAGC AGATAGGAGCAGTCGTTGTAAAGATGTTTCTGCTCCCTCAATAGGCTGTCACAAAGGTAGTGAAGCGGATGATCAAAGTAAAGCTCCTACTCAAAGTAAA GTTTCTGGAATTTCAAAAAGGAAACGGCATCGTGAAGCTGTAGAGTTGGAAAGAACAACTGCGAATTATGGAGCAGATAGGAGCAGTAGTTCAAAAGAAG CGAATGCTCCCTCAAAAGGGAGAGATGTGGCTTCTGAAATATCAAAAAGGAAGCAACAGCGTGAAGCTGTTGATGCTATTCTTTCCTCATCTTTGTTATC TACTAAGAAAGATGAATCCTTAGCAAAAGCTTCTGCAAAAAAGCGCATTTCCTCATCTGTTGGGAAGGGGAGTATGAAACCACCCAAGACAAGAAATGTG AGATCAAATGAATGAGCCGGGAGTAAGGAAGAACCAAATTTGCATTGGTCCTGTAATAATCACCTTTTTGGCATGGCCTTGTTTCAACATTTTTTGCTGC TCGGTGCTGCTTTCCCATCTGATATAATGGAATCGATTGGAGAGTAGAATTTTGTTCACTGGAAACAACTGATTTAATATGATGCAATGGATGTTGGCTA TGATGACAATAGTTAATTTTTTGTATAATAATGGTGTAAAGGCGAAATTTTTTGTTCATAATGTATACTTTCATTATATCGTATTTTATTTTATAAATTA ATTTCTTTTGGCAGTTTAAA
• Tissue: pods
• Gene name: LI_gene_144242;
• Additional information: details;

Expression of Ll_transcript_364869

FPKM

• PAB: 0
• PNAB: 3.5
• PS1: 1
• PS2: 1.1
• PS3: 3.9
• PW1: 1.5
• PW2: 1.3
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_364869

• Blastp: Helicase SEN1 from Saccharomyces with 30.59% of identity
• Blastx: Helicase SEN1 from Saccharomyces with 30.18% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YLR430W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447624.1)
• Pfam: AAA domain (PF13086.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;