Id Trinity | TRINITY_DN46381_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_364871 |
Sequence | TTTGCAAGACGGGGAGCATGAAAAGCAACGGAGGCATTTTCTCTATTTCCTCCTTCATCAAGTGCCAGTGAGCAGTAACTTCAGCATTCTAATAAGAAAG TTGTCATGCCAGATAGCGCTTCTTGTTGTACACCGAGGATACAAGATGAACCCACCTTGCCCACCTTCTGAGTGTGCACATATGTGGGGACCTGCCCTCG TGAAATCTCTGAAGGACTCCTCGCTTCACAATTCTTTGAGGCAACCTGCTTTTGACCTTATACAGACTATCATAGTATCGGATGCTACTGCTTTAATTTA TTCGGTGCTGAATTGCTGCACAACTCCAACCATTGGTAATAGCATGGCATATGAGGTCATTGAGTTGGATGATGAAAATGATGATACTTGGCTGCCATCT ATTCCTGATGGTGAAGAGAAGGATAGTAGTAGTTCTTGGAGTGAATTCAGTGTGCAGAGTGTAATAACATCTCGAGAGTGCCGAGAATGGATGTGCATTC CAATGCTATGGTTTGATGTTTTAGTTGATATCAATCCCTCAGTCCTTCCAGTATCATTTTCCAAGGCTGTTTTCTGGGCACGATCTCGTTTTCCTATGGT AGAACTTGAGAATAGTGCAGAAACAGTGCTTCCAGTCAGATCTTACCTATCATCTTATGCTGCAGAAATTTCCTCTTCATTTGGCTGGAAGGTTCCAACT GGAGCTGATGATGGTGGAGGGAACAAATCAAATAACTCAGTTGAAGTGTTGACTATGTCTTCTCCTTTAATAAGAACATTTAACAGGTTAACTGCACATT TTTTAGCTCAGATGGGACAAGGAGAGCTTCGAAGTCAGTGGACTTGGGAACCATTAATGAGTGAAAGCTTGATCCTTTCGCTTTTGGATCCAAATGATGA TGTTAGGCAGTTTGGAAAGTCTATGTTGGAACAAATTTCAGATACCCGTGGTCTTTCATATGGATTGAAGTTTCTTTATTCTCACAAACTCTCATTGTAT GCAACTATGTTAGGCCTCAAACATGCTTTGAAACTGGTCCAATTGGATTCTGTTCTGTTGAAGTTTCATGCTCTACATCATTTTTGGTTTCTTTTATGCA AATTACTAAAAGATGGGGATCCACCTGCTTCAGAGTCGCTTGAAAATACACATGGTGGAAAGGTGCCGGAATTCTCTTCACAAGGCGGGTTTCTCAAGCA GCCGGCTTTTGATTCTCTACCTCTGGGTATTGATAAACAAGTTTCTGATGCTGAAAAAAAAACAAAGGAGAAATTTTGTTGCTTAATATCTGAAATGGCA TGGCCTATTTTTTGTATGTGCCTTGTAAAAGGAAAGGAGTTTATTGATTTCAATTTTTGCCAGATGACTTGTGTTCGGTTACTCGAGATTCTCCCTGTTC TTGTTGATAAGCTCCATCTATTTGTTGGTAAAGAGCTTGTGAATTTCACAATGCTGGTAAAAAAGAAGTTGGATTTCAAATGGCTTCATGATCTCATAGA ATGGAGAAAGTCATCACTTGAAGTTGTTATTGTTTATTGGAAGCGAGCAGTTACTTATTTACTGAACCTGTTCAAGGGTTCTTGTGATAAAAGTTCTGTG TCGATAATCGCGACCATTGAGAATATTATTTCAAGTGATGGCTATCCTTTAGAAGAATTGGCGGAACAAGTGTCTCGCCTGTCTGTTTCTTTATCTGGGG AAGATTCTCGTAATTTTCAGGAGGCAAATATGAAACCCAAGTCATCAGTATCTGAAAGGTTGTATTTTGAGAAGAACTGTTTTACTTCAGATATGCGTTT TTCATCCGTTGAGGATAAAGGAGTACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAGTTATTCTTTTAGATGATGAAGAG GATCCAATTGAGGATAAAGGAGTACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAATTCTTTTAGATGATGAGGAGGATC CAAATGAATTTCCTATGGTCATTTTATCAGATATTAAGACAGGCCGCCACATGTCTGATGGCAAGTCAATGTCCTGTGATGCGGGTAAAACTTCACCAGC TTCTGGCCTTGCAAAACAGAATGTTTCTTACTTGAAAACTTCCAAGGAAATGGAGTCAACCTCCCAGAAAAAGGCAACTAGTGATGATTTCAAAATTTCT TCTCAGAAACCGGACTCTGGTAATATGCACGATAAACCTGTTATCCCTTCGTTTACCAATTCCAAAGAAAGCCTAGGCATTCGTAACAGCAAAGAAACTA GCTCAAAATCTGGCGATAGGGTGAATTTGTCAAATTTTTCTGATGAGTATAATAATGCTAAAAATTTTAAGAAAGCTTGCAGCATTGCCACTTCTAAAGC TGGTGTCTCAAGCAATATTAGTAAAACGTCAAGTGAGTTTCAGGAGGCTGTAGTTAATCGGGTAGAGACTGCTCTGAAATCTGTGGGATGTGTCCAGTTG CATGCACCAAAGCCTACTTCCGTTTTAAGAAGGCAAGTTATTCAACTCAAAACACCTTTTGAAAACAGATCCAACTCTCTCCGTAAAGTAGAGGACCCAT TGAAAAGATTCAAGCCACCAAGGTTGGATGATTGGTATAAACCTATTCTTGAAATAAATTATTTTGTGACAGTGGGGTTGTCATCCCAAAGAAAAGATGA AAACCAAACTGTTAGCAAATTAAAAGAAGTTCCTGTACATTTTCAATCACCTGAGCAGTATGTGGAGATATTTCGGCCATTGGTTTTGGAGGAGTTTAGA GCACAGCTACAAAATTCTTTTATTGAGATGTCCTCATGGGAGGAGATGTTTTATGGAAGCCTTTCTGTGATGTCAGTGGAGAGAATTGATGATTTTCATC TTGTTCGTTTTGTCCATGATGATGGTGATTCTGCAACGGGTTGAAAGGCGTGAGAAAGGCAATAAAAGAAGTTTAAATATTGTTCTTATCAAGTTCTATT TTCAAAATGGCTCTTCACGTTTAAATCAAGCTAGGAGGAATCTCAATGAACGGAGTAAATGGCATGCATGCCGTATAATGAGCATTACCTCACATATTCG GGAGTTTCAGGCATTGTCATCAGTAAAAGCTATCCCCTTACTCCCGCTCATTTTAAATCCTGTGAAGGATTCCATTCATCTTAATGGCTCTAAAGAAGTA GATCTCATCAAGTTGAGCCAGCCATTGCAGCAAACTCTGAGGTCGTCATTTAATGTCTGTCAGCTTCAAGCAATTAGTGTTGCTATTGGAAGGGCTAAAC CAAAGAAAAATGTTGAATTATCTCTTATTCAGGGTCCTCCAGGAACTGGGAAAACACGAACTATCGTTGCAATTGTCAGTGCCCTTCTAGCTGCTCCTTC ACAGAAGGTGAATTGTCTAAAAAATATTTCAGATGAAAATTTGAACCGTCATTCTTTATCTTCCTCTTCAAGACCAAAGATTAGCCAGAGTGCTGCTATT GCAAGGGCATGGCAGGATGCAGCCTTGGCTAGACAATTGAGTGATGATGTCCAAAGTTCATCAAAATCTTTTGGAAATTGTGTGAAACAAAGAGTTCTTA TCTGTGCTCAATCTAATGCTGCAGTGGATGAGTTGGTGTCAAGAATTTCTAGCCATGGTCTCTATGGCAATGATGGGAAAATGTACAAGCCCTATCTTGT GCGGGTTGGAAATGTAAAAACTGTCCATCCGAATTCATTGCCATTCTTTATTGATACTCTTGTTGACCAACGTGTTGCAGAAGAGAGGATGCATGTGCAT GATGGGAAGAATGACTCGAGGGTAGATTCTTCAGTGGTGCTGCGGTCTAATTTAGAGAAATTAGTTGATTCTATTAGATTCTATGAAGCTAAACGTGCCA ACTTAATGGATGGAAATGCTAATGTTAAAACTCATCTTCATGATGACTCTCACTTGGAGGATGAGAAGGAATTGTCTGATGCAGAAATTGAATTGAAGTT ACGTAAATTCCATGAACAGAAAAGACAAATATATAAAGATCTTACTAATGTTCAGGCTCAAGAGAAAAAAGCCAATGATGAAACCTGGAATCTTAGAAAT AAGCTGCGGAAATCTATATTGAGGGAAGCTGAAATAGTAGTAACTACATTAAGTGGTTGTGGTGGGGACCTTTTTGGAGTTTGCTCTGAAACAATGTTAA GTTCCAAGTTTGGGGGTCCATCTGAACATACTCTGTTTGACGCTGTTGTAATTGATGAAGCTTCCCAAGCTCTTGAACCTGCTACTCTGATTCCTCTTCA GCTTTTAAAGTCAATTGGAACCAAATGCATTATGGTTGGTGATCCAAAGCAGCTGCCTGCAACTGTCATCTCAAATGTTGCTAGTAAATTTCTTTATGAA TGCAGTATGTTTGAACGTTTACAAAGGGCTGGGCATCCTGTGATTATGCTTACTGAACAGTATAGAATGCATCCAGATATATGCAAGTTTCCTTCATTGC ATTTTTATGACAATAAGTTACTGAATGGCTGCCAAATGTCGAGCAAATCAGCACCATTTCATCAGACCAAGGGTCTCGGACCTTATGTATTCTATGATGT CATTGACGGTCTGGAAGTTCATGGGAAAAACTCTGGTGGAATGTCGCTTTGTAATGAGCATGAGGCTGATGCTGCAGTTGAAGTACTAAGGTTTCTCAAG AGAAGGTACCCAACTGAATATAATGGTTGTAGAATTGGTGTTATTACTCCATACAAGTGTCAACTTTCTCTTCTGAGATCTCATTTTCTTCATGCATTTG GATCTTCGAACGTATCTGAAATTGAATTTAATACTGTGGATGGTTTCCAAGGTCGAGAGGTGGATATTTTGTTACTATCTACTGTAAGAGCTACTCATTC AACCACTGCTGCATCTGAAGTCAAATCCAGCACTATTGGATTTGTTGCTGATGTAAGACGGATGAATGTTGCCTTGACAAGGGCCAAATTATCACTTTGG ATTTTTGGTAATGCAAGGACATTACAGACAAACCCTGACTGGGCTGCTCTTCTGAAGGATGCTAAAGAAAGAAACATGATCATATCAGCTAAGATGCCAT ATCATTCAATATTTAAAACAGCTGAAAATAAGTGCCGTGTTCAAAATCCCGATAAGCATGTAAGACCATTACAGCATGAGAAAAAGGCTAAGGATAGTTG CCAGAACGGAGCAAAAAAATTGGGTAATGACAAGTGTACTTTTGAGAGAAAAAGGAAATGCATTTCTTCTGACGTCAAGGACAGGAATAAGGGTAATAGA GATGAGAGAGCTATTTCACCTTTAGGAAAAGATGTTCCATTTCAGGGAAGCAATTCCGAAGAACATATTTCCATCAAGGACACAGCATATCTTGTTGCAA CACATGAAAACAGAAGCTCCTGTTATCAACAGGTTAGTAACAGTGGAAGAGAATGCAGGGATAAAATGAAAAATTCGGGTAGGACAACATTGGGTAAGAG GCTGTCAAAATTTCAGAATTCAGGAAATAATTTAGACCATTCAGTGGAAGAGACAGATGATAGGCATAAGGCATCAAAACCTGAGTCAAAAAGACCAACT ATGTGTTCTGGAGCAGATAGGAGCAGTCGTTGTAAAGATGTTTCTGCTCCCTCAATAGGCTGTCACAAAGGTAGTGAAGCGGATGATCAAAGTAAAGCTC CTACTCAAAGTAAAGTTTCTGGAATTTCAAAAAGGAAACGGCATCGTGAAGCTGTAGAGTTGGAAAGAACAACTGCGAATTATGGAGCAGATAGGAGCAG TAGTTCAAAAGAAGCGAATGCTCCCTCAAAAGGGAGAGATGTGGCTTCTGAAATATCAAAAAGGAAGCAACAGCGTGAAGCTGTTGATGCTATTCTTTCC TCATCTTTGTTATCTACTAAGAAAGATGAATCCTTAGCAAAAGCTTCTGCAAAAAAGCGCATTTCCTCATCTGTTGGGAAGGGGAGTATGAAACCACCCA AGACAAGAAATGTGAGATCAAATGAATGAGCCGGGAGTAAGGAAGAACCAAATTTGCATTGGTCCTGTAATAATCACCTTTTTGGCATGGCCTTGTTTCA ACATTTTTTGCTGCTCGGTGCTGCTTTCCCATCTGATATAATGGAATCGATTGGAGAGTAGAATTTTGTTCACTGGAAACAACTGATTTAATATGATGCA ATGGATGTTGGCTATGATGACAATAGTTAATTTTTTGTATAATAATGGTGTAAAGGCGAAATTTTTTGTTCATAATGTATACTTTCATTATATCGTATTT TATTTTATAAATTAATTTCTTTTGGCAGTTTAAA BLAST |
Tissue | pods |
Gene name | LI_gene_144242; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364871
Blastp | Helicase SEN1 from Saccharomyces with 32.8% of identity |
---|---|
Blastx | Helicase SEN1 from Saccharomyces with 32.27% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YLR430W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447624.1) |
Pfam | AAA domain (PF13086.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |