| Id Trinity | TRINITY_DN46384_c4_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_366401 |
| Sequence | AAAAGGTTCTGTTTTGAAAAAAACAAATTCTTCTTTAGTCTCTCTTCCTTTCTCCACAAAACGAAACCCTCCCATTCTTCTTCTCTGTTCAAAATCTTCA CAAAACGCTGTCGTTTGATCAACTCCTCAGCTTCCCTATTTTTCTCTCACCCATCGATTCTCCACTCATTATCTCAAAGGTAGTAAAAAGGCTGAAGCAT AGGCATTTGTTGTTTAAACAATGGGGTCCAATTCACTGAAGGATTATCTAAAAAGGTACGAAAGTAACACTGAAGAAGAGAAGAAAAGTAAGAAGAAGAA GTCTAAGAAGAAAACTCAGCCACAAGCAACTGGCTTATTAGTCGTGGATGAAGATCCTACATGGCAGAAACCCATTGATCTTGGAGAAGAAAAGGATGAG AACTCATCAGATGAGGAGAAACCACTAATTGAGGAAGACATTGAGGTGAAGCGTATGAAGAGGCTTGAGCAGCTGAGGGCTAAGCGTCATTATAATGCTA TATCCGAGGATGGTAGCGGTTGGGTTTCACTTTCTTCTAACTCTGTGGATCCTGTGAACTCAAGTATTGATATGTCTCCACCCCGTAAGCGGAGGGTTCG AAATGACACTCCTTCACCAGAGCCTGAATTAAATCTTTCAACTTATAACAAAAAGGGTGTTGATTTATCACCCTCTCATCAGCGGTTGAAACGCTATGAC ACTCCGTCACCTGAACATCACTCACAACCACCACATTCCAAGGGATTGGATTCAGATTTTTCTCCCCCTCGGAAACATAGAGTTGAAGATGATGATTTAT CACCTCCGCGGAAGCAAAATAAAGGTCACCCGCCGTCCTCAAAATCTGCTCATGCAACTAACCTGAGTCCTGACATTTCCCCCCCTCGCCGTCCTCAAGT TAATACAACAAAGAATCACGAAAGAGCTAATTTACGTGATCTCTCTCCACCTCGGCGAGGTCGTCATGATTCTCCCTTTGAAGATAATTTACATGGATCA GCAGCATCGGACCTTTCAAACTCTAGGACAAGTCGGAAGGATGTTGCAAGATCGGGTTTGTCTGATCATTCTCGCGGCCGTTCACCTGGTCTTTCTGTAA AAGGTTTTTCACGTCCGTCTTTGTCACCTGATCTATCTCCACCGAGGAAAAATCAAAAGGACCCATCCATTCCAGCATCTGTAAACGAGAGAAAAACTGG ATTAATATCTGGTAAGGATATCAGGGAAGAGATTGATAGAAAGAAGAAGGATGATTTGTCAAGATTTAAGCTGATGGACACTTCTATCAGTGGACGTGGT GCTGAACCGACTTATCGTGATAAAATAAAAGGAGTACGCATTTCGAAAGAGGAATACATGAAGTCCAAACAGAAAGTAGAAGAAAAGCCTAAGGAGATAG AAATAGAATGGGGCAAGGGCTTGGCTCAAAAGCGGGAGGCTGAGGCTAAGATGAAGGAACTAGAACTTGAGAAGGAGACACCTTTTGCACGGACCAGGTA CACAAAAAATCTTAGTATTATAGTAGCCATTGCTTTCCTATTGATTGTCATGTGTTAATCTGATAACCTCCAGGGCTAGTCTTTTTCACTTGGTTTGGAC AAACCAGATTTTCAGTCATCTGGTTGATCGCGTCCCTTAAAATTCTAATCTTGATAGTCTGCAAAAAGTACAGGTTGAGGTGGATAGTCAATTTGCATTC CATAATTAGTTTTGACTCTAGGGTCTAGGCTGTAAATTGGTTTATATTTGTTTCATGAGTGCGTGAAAGTTCTTACTCTTAGTTAATAATCTGTTATTTT GATATTTGATCCTCATCTCAGCTGACTTCATGAGTAGGGTTTCTTCACTTTATTGTGACTTACGACAGATGATAATCTGGTTTTGTTTGTTCTCTATATT GTACCCGATCAGTAGTATATGTGGCTCAGTCACTTTTTGCACTGGGGTGATGCTAGGCATCTCCATATTTACAAAGCCCATATTACCCAATGTTTCTTAT CTTGATATAATGTTATTTATAAAAAAAAAACATTAATAATTAAAGTGGAAATTTAAATGTTACTGCAACCATTGCTAATAAATAGTTTGGGCTCATCACT TCCACTCTATGAAATATCTTTTTTACTTGAAGTAGTCAAAGCAAATGATACCATCCGCAGCTTCCAAGCATGGCTTGTACCCGGATATGCCATGTTTGTC GTTATAATGTGTCCTCCCTGTTTAATGAATAATGATTATGAACAAGCCATGGGCTGTAATTTATATGCATTATTGGTTTTTATTGTGAGTTGGTGTCATT GAAAAAAAGGTTTTCCCTTTCCTTCTTTTCTCCTGATACTATACTGCAATTATAGCTGTGTTTTATATTTTTTGTAGAGATGATCCACAACTTGACAAAA TGCTGAAGGAGAGATTAAGATGGGGTGATCCTATGGCACATCTGGTAAAGAAAAAATATCCAGAGCCTGTTCTTATGGACTTTGGGGAGAGTGATAAGAT GAAGGAATCAGGCTTTGTCGTTCCTCAGGATATTCCAAGTCATAGTTGGTTAAAAAGAGGTTTAGAGGCTGCACCAAATCGATATGGGATTAGACCAGGA CGGCATTGGGATGGTGTTGATCGCAGTAATGGGTATGAAAAGCAACTTTTCAAGAGAACAAATGAGCGGCAAGCAAAAGATAAAGAAGCTTATCTTTGGT CTGTGTCTGATATGTGAAAACTCATGGTATTCAGACAATGGGTGGTTGAGGGATTTAATATTGGGATGCATGTTTGGAAAAATTGCTGCATCTGATGTTC AATCTTTAGTTGGAAAAATTGAATGAAAAGATAATTTGTAAGGTTCAATTTTATCCCAAGACAACATAGTAAATTAAAACAGAGTAAACTAATTTAGTTT TGAAGTTATTGTAGGAGAATTACACTGACAATTTTTTGGTAATAAGTTACCGTTTGTTCAAAGCAATGTAAGCTAATTACAGTTTGAAGTTACCCAGATC CTGTGAGCTTTTTCCTTCTGATGGGTTGGTCAATATTATGGAACATTGATTAAATATTGTTGAAGGTTGTTTAATGTGCATTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144257; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_366401
| Blastp | BUD13 homolog from Gallus with 29.53% of identity |
|---|---|
| Blastx | Pre-mRNA-splicing factor cwf26 from Schizosaccharomyces with 40.18% of identity |
| Eggnog | BUD13 homolog (S. cerevisiae)(ENOG410XSEZ) |
| Kegg | Link to kegg annotations (428248) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419847.1) |
| Pfam | Pre-mRNA-splicing factor of RES complex (PF09736.8) |
| Rfam | - |
| GO | - |