Ll_transcript_366364

• Id Trinity: TRINITY_DN46388_c1_g1_i4
• Name Transcript: Ll_transcript_366364
• Sequence: CTTTCATAGAAACACACCTTCTTAATTTTACTACAAAAAAGGACTCCATCATATTCCCAACATATTCTAAGAATCTACTTTATATCTCTCTATCACTGTC TTTGTAGAAAAGATTATAAGCCACAAAACTCTCCATTAAGTCTCTTCCATGTGGAGTTGTTTGCAACTATTATTAGTTTCCAATTTCTCTGTTTGAAAAC TGTGACTGCAAGTTGCTGAATTTAAAGTACCACTAGTTTTTCTATCTCTGCTGTGACCTTTTGTGTGTGCAGGAAAACTAGGAGCAAGTTGGTTATGATA ACAGAAGAAAGTCATGGCCTTTGCATTGTGATCTTCTGAACACCCAAATGGAAAACTGGGAAAAAAATTCATCTTTTACAACCTCCACAGTTAATTCATT TCCTGTAAGTTTTAGCTTCCATGATCTGCTATTCTCAAATGGGTTTCTCTCAATTTTTCATTCTTCTGTTTCTTCATGTGATGGATTTTTTATTGTCCAA TTTTTTCCTTACTATAGTCTAGAGTTTATAGATACAAGGCATAAACAATGTTTTCTAACTTATCATTCATTTTCATTCATGCTTCTTGTTTATCTTTGTT ATAAGAAAATTTGGAACATGTATAGAACATAAAAGGGTCTTGTGTACCTCCTTAGAGTACTCTTTCTATTTTCTCACTCTTTATGGCTCCTATCATCTTA ACACAATTGTTGTTTTCTGCTGTGGAACAAGCTTGAAAGCATATGTGAGAATTCAGAAATTGCTAACAAAAAACAGAACCCTATGAGTTTCGTCCCGGCT CTTCGGTCTGGAGAGTGGTCTGATATTGGAGGACGCCCTTACATGGAGGATACTCACATATGCATTGGAGACTTGGCAAAGAAATTTGATTATGACACGC TTTGTGATGAAACTGTTTCCTTTTATGGAGTATTTGATGGACATGGAGGGAAGGCTGCTGCTCTATTCGTCCGTGATCACTTGCCGAGGGCGATTGTTGA GAATGCTGACTTTCCTTTCGACCTCGAGAAGGTAGTCAAGAGGTCATTTACAGAGACTGATGCAGAGTTTGCAAAAACATGCTCTATTGAGTCTTCCCTC TCTTCTGGTACAACTGCACTCACTGCAATTATATTTGGAAGGTCTTTACTTGTTGCGAATGCTGGAGATTGCAGAGCTGTTTTATGCCGAACAGGAAGGG CTATAGAAATGTCCAAAGATCATAGACCCTATTGCATTAAAGAAAGGAAGCGGATTGAGTCCCTAGGTGGATTTGTCGATGATGGTTACCTGAATGGCCT ATTAGGCGTTACTCGTGCTCTAGGTAACTGGCATCTTGAAGGAATGAAAGAAAAGAGCGGAAGAGGTGGACCGTTAACTGCTGAGCCTGAACTTAAACTG GTGACATTGACCAAAGAAGATGAATTATTGATCATTGGCAGTGATGGAATCTGGGATGTGTTTCGCAGCCAAAACGCGATTGATTTTGCTCGAAGGAGGC TCCAAGAACATAATGATGTGAAACAATGTTGCAAGGAAATAGTTGAGGAAGCACTGAAGAGAGGAGCAACAGATAACTTGACAGTTGTGATGGTATGTTT TCACTCAGATCCACCACCACATATGGTTGTAGAGAGGGCCAGAGTCCGGAGAAGTATATCTGCTGAGGGACTTCAGAATCTTAAATGCTTGCTAGAAGGA CAAAACATTGTTGTCTGAAATACAAATGCTTGCTAGAAGGACAAAACATTGTTTTCAAGCACATTTTATGTACATATTTTCATCTGTCACACAGAATAAT ATCTTCTTGTCCTGCAATCTGCTCAACATAGACCCTGAGAGTACAGAAAAAGAACAAACTGAGGAGCAAAGTTTCTAACAAAAGTGTTACTATGTTACAG TTATTTATCCCATTGTTACTGGGAAAGTGAGTGAAACAGATTAGAGGAAAAGAATAATGTATATGTTGGACATGTGATTGGTTCACACATCATTGTAGCA TTGTACTCTTATTTTACTTTGTTCTATAGTTAAATCAATGCAAATAAATGTTTAACAGCCAAGCTCCTCATTGTAGAAAGACTGAGGTAGGGACATTTGT TTTATCAGCTACAGAAGCACCAAGATGCCTATAATCTTTTGCTATATACCTCTTTCTTTGATGATTTTATTCGATCAAAA
• Tissue: pods
• Gene name: LI_gene_144275;
• Additional information: details;

Expression of Ll_transcript_366364

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.7
• PS2: 0
• PS3: 0.5
• PW1: 0.3
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_366364

• Blastp: Probable protein phosphatase 2C 27 from Oryza sativa with 71.99% of identity
• Blastx: Probable protein phosphatase 2C 27 from Oryza sativa with 69.42% of identity
• Eggnog: Phosphatase(COG0631)
• Kegg: Link to kegg annotations (4331028)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463094.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;