Id Trinity | TRINITY_DN46392_c0_g1_i2 |
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Name Transcript | Ll_transcript_365115 |
Sequence | GCTGTTGAGGCTCACCATCTAAACCTCTTCTCTTCTCAACTCATACACAACGGGTACATCAACATCTCTTCTCTTCTTTTCTATTCATTTTTGTTATTAC TATTTTATCCCTTCTTTCTCTTACACACTCTCTATTTTTGTTTATTTATTTATTTGCAGAGAAATGATGATGAATCCTATGGATGCCAGCATCAACCTCT ACCACAATAACTACTCCTCGCTGTTTCCTTTATCGGGAACCACTACAGCCACCGCGTCGGAGACTCTTCTCCACCCAGCGCCACCGTATAACTCCATTAT CGCCGATTCGTTTCCTCCTCAGAAAACCATAACCGCTATGAAATCTGACGTCAGCACTCTCACTTATAACAACTACAACAATGTCCCTGTATCAAGAAAA CGCTCCATAGATTCCGTCAATTACTCTCTCCCGTATCATAAGAATCGTGTAACTAACTTTTCATTTCTCGGTGAAGACATGTCCCTCCAAATCCATCATC AACAACTCGACCTCGATAATCTCGTTTCTCAACACATGGAGAAGGTGAGAATGGAATTGGAAGAGAAGAGGAAGAGACAAGCGAGGATGTTAATGGAGGC TGTCGAAGTTGGAATGATGAAGAAGCTAAAATCGAAAGAGGAAGAGATAGAAAAGATTGAGAAATTGAACTACGCTCTTCAAGAAAAGGTCAAGTCTCTA TGCATCGAAAACCAGATATGGCGAGATTTGGCGCAAACAAACGAAGCAACAGCAAACACTCTCCGAACAAATCTCGTCCAAATTCTGTCTCAGGCGAGGG ATAACGACGGGGAACACGGCGGAGCCACGATGGGAGCGGTTGTTGAAGAAGCAGAGTCTTGCTGCGGAAGCAATGATGAAAATGAAGGGTGGCGTATGAT AGGAAGAGGTGCGCAGGATAAGGAGGTAGTTGAAGAAGGTAGTGGGAGTAGAGTAATGAAGAATGAGAATGGGAGATTGTGCAGGAAGTGTGGGAAAGAT GAATCGTGTGTACTCATCTTACCTTGCAGGCACTTGTGTCTTTGTAATGCTTGTGCCTCTTCCCTTTACACTTGTCCTATCTGTAATTCCTTCAAAAATG CTACCCTCCTTGTAAACCTTACCTAATTTACATTCTCATTCTACTATATAATTTCACAAATGCAAAGTTTACTTAACCAGTTTCTTTGACGTTTAAGATT GTGTATATATTTCAAGAAATTATACAGCATAAGTGATAAAAAAAAGAGTTGTAATAGATAGAGAAAAAAGAGCAATACGTAATTGTATAGTTGAAAAATT AAGTCCAAAAAAGTTAAAATATGGAGCTGGATGAAGTGTAAGAAAAGAAAATGTTGAATTTGAATCGATGTGTTATTCCAACGAACATAATTTATGTTTG TAGATATCTGCGG BLAST |
Tissue | pods |
Gene name | LI_gene_144313; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365115
Blastp | Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 43.24% of identity |
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Blastx | Probable BOI-related E3 ubiquitin-protein ligase 3 from Arabidopsis with 42.94% of identity |
Eggnog | protein binding zinc ion binding(ENOG4111S1X) |
Kegg | Link to kegg annotations (AT3G12920) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464916.1) |
Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |