| Id Trinity | TRINITY_DN46396_c3_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_365318 |
| Sequence | TGCAAGGATAAGATAAGAAGACAGAGTAATAATTAGATATAACTTTTTGATATAACAGTCACTACTCACTCCTCTGACAACAACACACTACATAACATAG GATAAAACAAAACCTCTGATTCAATTCAATCACGTCGCACTTTGCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCATCAAGTTCAGTGCAATG GCGAATCCAAAAGCAGAGATCTTTGAACTCAACAATGGAACCATGCAAGTTCTCGTTTCCAATCTGGGCTGCACTATCACCTCTTTATCTGTACCCGACA AAGATGGCGTTTTATCCGATGTTGTTCTTGGTCTCGACTCTCTTGATTCTTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGAGTTGC GAATCGAATAAAGGATGGGAAGTTTACACTAGATGGTGTTGAATACACTTTGCCTCTCAACAATCCTCCAAACAGTCTCCATGGTGGACATGTTGGGTAT GATAAGAAGGTATGGGAGGTAGTTGAATATGCGAAAGGCGAAACCCCCTCGATCACTTTGAAGTATCACAGTCATGATGGAGAGGAAGGTATAGATTATT CTCTTATCTGATTTTTGCTCTTCCTTGATCTTTATCCAATTTATGTTCTCTATTGTTATGTAAGGTTATCCTGGGGATATCACTGTTACTGCAACTTACA CACTCATCTCAAGCACAACTCTGAGGCTTGACATGGAAGGAGTTCCAAAGGACAAACCTACCATAATCAACTTAGCTCAGCATACATATTGGAACTTAGC AGGCCACGACAAAGCGAACATACTCGACCATTCGATTCAGATACTCGCTAATCATGTAACTCCTGTGGATCAGAATTCTGTGCCAACTGGTGAAATCATG CCTGTGAAGGGTACCCCTTTCGAGTTCACTTCGGAGAAGAGAATAGGCAACACCATCAATGAGGTTGGAATTGGATATGATCACAATTATATGCTTGATT GTGGAGAGGAGAAAGCAGGTTTGAGACATGCTGCAAAAGTGAGGGATCCATCAAGTTCAAGGGTGCTAAACTTGTGGACAAATGTCCCAGGTGTGCAGTT TTACACCGCGAATTATGTTAATGGTGTTGCGGGGAAAGGTGGTGTTGTCTATGAAAAGCATGCTGGGTTGTGTCTTGAGACACAGGGGTTCCCTAATGCT ATAAATCAGCCAAATTTCCCATCTACTGTGGTTAAACCTGGTGAGAAGTACCAGCACTCCATGTTGTTTGAGTTTTCAACTGAGTGAAGTTAATGTTGTC AAATTGGCTTTGGAATGAGATTGTCTTTTTGTTTTGCATACAAAGATTCTGAGCCTGAACTTTTGTGTCTTGCATCTTACTATAGTAAATAAAAATTTGT ATTTAAATATTTGTTTGATTTCACATTATGAGTTATTTTATGACTCCTAAATGTAGACATTATAATGCAAAACGTATCCCACTTTATGAGATGTTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144351; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365318
| Blastp | Aldose 1-epimerase from Sus with 47.43% of identity |
|---|---|
| Blastx | Aldose 1-epimerase from Sus with 44.93% of identity |
| Eggnog | converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose (By similarity)(COG2017) |
| Kegg | Link to kegg annotations (399536) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430465.1) |
| Pfam | Aldose 1-epimerase (PF01263.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |