Id Trinity | TRINITY_DN46398_c1_g4_i6 |
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Name Transcript | Ll_transcript_364678 |
Sequence | CACTCGTCTTTCTCACCAACTCGGTCAAATGCTCTTTCTTTCATTACTTGTGTTGTGAGAGAAAGAAGGTACCCGAGTCAATTGCACCCTCTTCTTTCTA TTCACCACCTCCCATTTATATTCCCTTCTACCTTCTCTCTTTTCTCCCTCAACTACTTTCCCACGTTCCATTCCTATTCCCTCATCATATATCACAAAAC ACACACAAATCTCACTCCTTCTTTCTCTCTCTTTTCCCTCTCTCTCAAACAAAAGCATGGGTAGATCTCCTTGTTGTGAGAAAGAGCACACAAACAAAGG AGCTTGGACCAAAGAAGAAGATGAACGCCTCATTAACCATATCAAGATTCATGGTGAAGGCTGTTGGAGATCTCTTCCCAAAGCTGCTGGCTTGCTTAGA TGTGGTAAGAGTTGCAGACTAAGATGGATAAATTACCTGAGACCTGATCTCAAGAGAGGAAACTTCACCGAAGAAGAAGATGAGGTTATCATTAACCTTC ATAGCTTACTTGGAAACAAATGGTCTCTAATAGCTGCAAGATTACCCGGAAGAACAGATAATGAAATTAAGAATTATTGGAATACCCACGTAAAGAGAAA ACTCTACAGCCGTGGAATCGACCCCCAAAACCACCAACCACTCAATGCCTCTGCCGCTGCCGCCACCACAGCTCCGCCTGCTGATACTGTGGCCACTATA AGCAACAAGAAAAGGAACAGTGATAGCATTAGCAACAACAATATTCAGTTGGTTAATGGTACTGAAGATTCAAATTGCAGCAGTGGCGTTACCACAGAGG AATTAACCTTTAACCCTCATAATCAACTCAACTTAGACCTTTCTATTGGTCTTCCAACTAATCAACCCACAGTTTCTTCTTCTACGATGAAACCAGAAAA CAACAAGAAGTTGAAACAAGAGCCACAAATTTTGTACAAGTGGTACAATGGGAACAACGTTAATACTACTCAACAAGGCGTGTGTCTTTGTTACGGTCTA GGGTTTCAAAGCAATAACAAAGCATGTAGCTGCAAAGCTATGGGAACTGCTGCTACTACAGTTACTGCTACAATTGCTACCAATAATGATGTGTGTAGAT TTTACCAACCCATGAGTTATTAGAATTTAGAGTTAACTGGGTGGGTCTTATGGCCTTTATATGTAATATTGTGACTGCTCTTGTTAGTTAACGTGAAAAT AGTTTTAGAATCCCAAAATTTCGAGAAATTTTTâBLAST |
Tissue | pods |
Gene name | LI_gene_144366; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_364678
Blastp | Transcription repressor MYB4 from Arabidopsis with 62.15% of identity |
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Blastx | Myb-related protein 330 from Antirrhinum with 89.23% of identity |
Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
Kegg | Link to kegg annotations (AT4G38620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414498.1) |
Pfam | Myb-like DNA-binding domain (PF00249.30) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |