Id Trinity | TRINITY_DN46399_c2_g1_i4 |
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Name Transcript | Ll_transcript_365354 |
Sequence | CTCTGATCATTCTACACAAAAAGCAAAGGAAAAGATGTTCTTGTATGATATTGTTGCAAATGGTCGCACTGAAATTGACGTTGACAAGTTTGACTATATT GTTCGTGATTCCCGTGCTTGTGGCCTGGGGTGCAACTTTCAACCTGAGAGGCTGATGGAGTCGATGAAAGTCGTGGATGATGAAATATGTTATCGTGCAA AAGATTATCTGACAATCCACAAGTTATTTTCAACCCGTGCTGACTTGCATAGAACAGTATATACACATGCAAAAGTACAAGCAATAGAATTGATGGTTAT AGAAGCAATGTTGAAAGCAAATCCACATCTTGATATCAAATCCTTGATTCATCAACCATCTGAGTTTTGGAAGGTCTTTAGTAGTTTGATAATTTTTTGG AGTTGGGATTTCTAATTTAGCATCATAGAACTATCACTCTTTTTACTTAAAATGCAGTTAGATGACTCCCTTCTTAAAAAAATTGAAACTTCTTCTGGAC AAGAGCTCAAGGAATCCAGAGACTTGATTCGACGCATTCGCAGAAGGGATATATACCAGTTCTGCAATGAGTTTTCTGTTCCAAAGGACAGACTAGAGCA TTTCAAAGACATCACATCCCAAGATATTGTTTGCTCTCAGTTGGACGGCACAAGTTTGAAAGAAGATGATGTTGCTGTCAGCATTGTTAAAATCGATTTG ACACATGGAAGTAAAAATCCTGTTGAAAGGTGCTTGAAAGAAATGATGATTACAATTAAAGCAGTTTATTTATTCTTCTATATTTGTTAAACACTGATAT ATGATGAGTGGTCTTTCTTCTTTGTGCATGGATCTCCTGTTCCAGAATCAACTTTTTCACGGTACTGAATTCACTTATACTCACAAAGTTATCTTTCTGT TTTATACATTTTCTAGTATTTGAACCCATGACCTCTAGGTCACAAGGCAATCAACCTCATAGTTGCGCCAAAGCTCACCCTCTTCTTTTATACTTTTTGA TAAATAAGAATGTTCTAAATTTTTTATTTCCGTGACCGCTTTTAAGTTATATTGCACATTAGTGTTTGTGAACATGACTACTGCAAGTATTGTGTCACAA GTAACAAAACTGAACAAAAGGCATACCAAAACAGTAAACTTTGGTAAAATTAGTGCATGTTGGGTTTCAAGTTGCCACATCCCTCAAATGTGATGTACTG ATTTTGGCCAAAAGCTACAGCTAGTAGCTTTGGGTAAACGTGCTTTGGAGGCTCCTCTACCGCAAAAACAAACATGTTATTAGAGTAGCTTTGAAGATCC TGTTTCTGCATAACTCCAATTGTTCTTTCGTTGAAGAAGCATTGTATTTCACATTAGAGCACTCTTACAAAGTCTCATCATATTACTGAATCCAAATTAC ATTTTGTCTATGTATTTTTAGAAGTAATATATGCTAATGTTTTGCCATTTCTTTAAATTGTTTTGCTTTTCTTACAATGCTTCAAATTTTTGTATCAGGA TTACGAGAGTAACAACAAATTCCTCATTTCAGATGAGGGCATCAGTCATTTGTTGCCAGTTTTTAACAAAGATGTCATAGTGAGGGTGTATAGTAAGAAG CCTGAACTGGTGGATGCTGTTTCTGCTGCCTTCGAAAATTATCAGCTCAAGATTTTCGGAAGGACAACACAAGTACACAGGACTCCTGAGAAGAAGAGGC GTCGAACGTTATCATTTGCAAATCTATCCCAGTGACCTCTCCAACTGCGAACTTGTAAATTTCTACTTGCTAGTCTCCAAATCAATATATTCATATATTC ATTTGCTGAATGATTGACGTATAAATGTCAGTGTGAACAGTTAGCTCTGTCAATATTGTTGATATCATTAGTTTCTACTATTTGATCTAAACAAATTTGT AAGTAAAAGTATTTTATGCATAGATTCGATGGTGTTTGGTCCCATTCAGTTATTCCGAGAGGACATATTTTTGGTAACGTAGTGGGCATATTATAGGATG CATGTCTCTGATAAGTAATGGTGTATTAGTTTTAATAGCATATGATATGATGCATGTCTCTGATGAGTAACGGTGC BLAST |
Tissue | pods |
Gene name | LI_gene_144374; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365354
Blastp | Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog from Dictyostelium with 45.24% of identity |
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Blastx | Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog from Dictyostelium with 36.82% of identity |
Eggnog | Metal Dependent Phosphohydrolase(COG1078) |
Kegg | Link to kegg annotations (DDB_G0272484) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439192.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |