| Id Trinity | TRINITY_DN46399_c2_g3_i5 |
|---|---|
| Name Transcript | Ll_transcript_365374 |
| Sequence | CTCATTAATCTTTACATGCGAAATTAACCATATGGATCCTCGAAAAACTCAAACTTTGGTAGAAATGGATATGTTCACTTCATAGGAAAGAAAATAACTC CATTTCTACACGTTGGTCTTGTAGCGTGTGTTAGGTGAAGGTTGTTCAAGTTCCTGTTAGAGCCTCGAAAGCCTTTATCTTTTCATCAAATTTGAATTCT TTCAATGGAATTGCTGGAGAAGCTGAAGATGCGGAAGAAAAAACAACCAGACAATAATGAAGTCGAAGGTGGTTCTGTTTTATGGTTTGAAACCTCTGTT TCTGTTTCTCGCCGCTTTCAATTCGAACCACAGGGCCAACTTTCTGTAAAGATTGTTGACGATTCCAGACCATTACACAGCAGGATTGTTGAGTCTTTCC TGCATAAATTTTTCCCCTCCGGATATCCATACAGCGTGAATGAAGGCTACCTTACATACACTCAGTTTCGAGCAATGCAACACATTACCAGTGCAGCACT ATCAGTGCTATCAACTCAGTCACTGTTATTTGCTGCAGGCTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGCTGGATTTTAAAGGATGGCATGCAA CATTTAGGGAATCTAATATGTAGTAATTTGGGTGCAAGAATGGATTCAGAGCCTAAACGTTGGAGAATTCTAGCTGATGCGCTTTATGATGTCGGCTCTG GATTGGAAGTGCTTTCTCCCTTATGCCCACATCTCTTTCTTGAAATGGCAGGCCTAGGCAATTTTGCAAAGGGGATGGCAGTTGTTGCAGCAAGAGCTAC AAGGTTACCTATATATTCCGCGTTTGCCAAAGAAGGAAATCTCAGTGACCTATTTGCTAAAGGGGAGGCTATTTCGACTCTCTTCAATGTTATCGGAATT GGAATTGGAATTCAATTAGCATCTACTGTATGTTCGTCAATGCAGGGAAAGTTGGTTGCAGGGCCTATACTTTCAGTTCTACATGTATACAGCGTCATCG AAGAAATGAAAGCTACTCCTATCAATACCTTAAATCCACAAAGAACTGCAATGATTGTGGCTGATTTTCTCAAGGCAGGAAATGTATCAAGCCCTGCTGA TCTCAGATATGGAGAAGATTTGCTGTTTCCCGGGCGTCTCATAGAAGATGCCGGAAATGTAAGAGTGGGTAGGGCTGTGCACAAGGTTATTAAGCCTTCA AGGTTTGTTGAATTACAACAAATGTTCCCCGAGGAAAAGTTTCTTTTAAATCGCAGCGATAAATGCATTGATATGGTGCTGCAAAAAGATGCGGTCGGCG AAGATGCATTGAGAGGGTGGCTAGTTGCTGCATACGCTGCACAAACCGACAAGTCCTCTCATGAGCTCAGTGCCAGTACCCTGCAAGAGGCCTATGAGAG AATGAATGATGTCTTCCCTGTGTTTTTAAAAGAATTACAGAACAAAGGGTGGCATACCGACCGTTTTCTGGATGGAACTGGGAGCCGCTTTGCGTTATAG TGTTCAAATAGATCCTATATTGACTTGAGTAGGTTATGTAACCCTTTTTTGTGATATAGGATGCATTGCATTTAATGGTTCAGATAAGTTGAACTTGATC TCACTCTTTTACTGCATTGTTGGATGGCTTGTCATAGCTTTGGGTTTATTGTTCTCCTTTCAACTGTAACAATGTAGAATGCATTCAATGCAGAATGCTT TGGGTTTACTATAATTTTATTGCAATGAAGAATGTATGACTCTGGAATAGTGAAAAGTGCTATTTGCATAATTAATAAACATCCGAACTCAGAAGGCAAG TTTTGATCACTGACAGAATTTGAAGATTATGCTACAGACATTCAAGACATACCAGAAATCTTGAAACAATGTTAAGTAATCTATCTTTTATATTTCTCAA AATACTCTTCAGGAATAGCTAAAACAAGAAAATTGTTTCTAGGGAATTCAATCAAGTTTGTGTATTTCGATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144381; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365374
| Blastp | Protein root UVB sensitive 2, chloroplastic from Arabidopsis with 72.73% of identity |
|---|---|
| Blastx | Protein root UVB sensitive 2, chloroplastic from Arabidopsis with 74.39% of identity |
| Eggnog | Chromosome 16 open reading frame 58(ENOG410XU74) |
| Kegg | Link to kegg annotations (AT2G31190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429195.1) |
| Pfam | Vitamin B6 photo-protection and homoeostasis (PF04884.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |