| Id Trinity | TRINITY_DN46399_c2_g6_i1 |
|---|---|
| Name Transcript | Ll_transcript_365351 |
| Sequence | TATTGGTAAAGGTTATTTTGTTAATGACATATAATAGACGCATTATACATTTATACATACACATCAAGCACTAACAAAACCGTTTCGGTTCTTCTCCCCG CCACAATTTCCGCCTCCGCTTCGTTATGGAGGAGCAAGGTAGCAGCAATATGAACACGAAGCAGCACCATAACCAAGGCACCACCACCACCACCAATAAC AACAATGCCTATGTTGACACAACGAAAGCAGAGAGAGCTGTGTGGCTATTGAAGTGCCCTTCCATGGTTTCTCGCTCCCTCCGATCTTCACCTTCTGATG ATCCTTCTCTTCCCATTGCTAAGGTTGTTCTTTCCATTGATCCTCTCAATTCTAACGATGATGATTCTCCTCAGTTTACTATGGAGTTGGCTGGAACTGA AGCTGGGAACATACCCAAATGTTATGACATGGATATGACTACAGACTTCATTCCCATGTCCGTATTTTCAGACACACCACAAGGAAAGATCTCTGTAGAG GGAAAAATACTGAACAAGTTTGACATGAGGCCCCGTAATCAAAGTCTTGAACTCTATGGGAAACTCTGCCGTGAAAGGACAAACAAATATATGGTCAAAA ATAGACAGATACAGGTTATTGACAATGACAATGGTGCTCATATGAGGCCAATGCCTGGGATGATCATTATGGCTTCTGCACCAAGTGATAAGAAGAAAAC TCCAGCCAGAGGAACAGAAATGAAGAGAACAAGAAGGGACCGAGGTGAGATGGAAGAGATTGTGTTTAAGCTCTTTGAACGACAATCAAATTGGAGTTTA AGAAACCTCATACAAGAAACTGACCAACCTGAGCAATTTCTGAAAGATATACTCAAAGATCTGTGTGTCTACAATAACAAAGGAGCTAATCAAGGCACAT ATGAACTGAAGCCGGAATACAGAAAATCTGGCGATTAAGCAAGCCTCTAAATAAGTTTTATTGATTGATACTGATCAATTTGTTAACTTCCTTCTCCTAA TATATATAGTTTACTAATTCCAGTGTTTTTCTTCTTTTCCTGTTAGTTCAAGTTGCAAAATGGAGCAGTATGCATCCTTTTGACTAGGGTAAGGTTGGAG TGAATTTTAATGCCATCTGCTATTTTCAGTGACTAGGATAATAAGATAAGGTTGTAGTAATGTAACTTCAACTTTCTGTTCTGTTCAAAATTGGAATGTT TTTCATGTGCTTGAATCTTTTTTTCCCTAATTAGCAAGTGATTGCAAGATGTTTAACATATAAGTGTATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144384; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365351
| Blastp | General transcription factor IIF subunit 2 from Sophophora with 26.46% of identity |
|---|---|
| Blastx | General transcription factor IIF subunit 2 from Bos with 30.77% of identity |
| Eggnog | factor iif(COG5090) |
| Kegg | Link to kegg annotations (Dmel_CG6538) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459446.1) |
| Pfam | Transcription initiation factor IIF, beta subunit (PF02270.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |