Id Trinity | TRINITY_DN46399_c2_g6_i3 |
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Name Transcript | Ll_transcript_365367 |
Sequence | TATTGGTAAAGGTTATTTTGTTAATGACATATAATAGACGCATTATACATTTATACATACACATCAAGCACTAACAAAACCGTTTCGGTTCTTCTCCCCG CCACAATTTCCGCCTCCGCTTCGTTATGGAGGAGCAAGGTAGCAGCAATATGAACACGAAGCAGCACCATAACCAAGGCACCACCACCACCACCAATAAC AACAATGCCTATGTTGACACAACGAAAGCAGAGAGAGCTGTGTGGCTATTGAAGTGCCCTTCCATGGTTTCTCGCTCCCTCCGATCTTCACCTTCTGATG ATCCTTCTCTTCCCATTGCTAAGTTTACTATGGAGTTGGCTGGAACTGAAGCTGGGAACATACCCAAATGTTATGACATGGATATGACTACAGACTTCAT TCCCATGTCCGTATTTTCAGACACACCACAAGGAAAGATCTCTGTAGAGGGAAAAATACTGAACAAGTTTGACATGAGGCCCCGTAATCAAAGTCTTGAA CTCTATGGGAAACTCTGCCGTGAAAGGACAAACAAATATATGGTCAAAAATAGACAGATACAGGTTATTGACAATGACAATGGTGCTCATATGAGGCCAA TGCCTGGGATGATCATTATGGCTTCTGCACCAAGTGATAAGAAGAAAACTCCAGCCAGAGGAACAGAAATGAAGAGAACAAGAAGGGACCGAGGTGAGAT GGAAGAGATTGTGTTTAAGCTCTTTGAACGACAATCAAATTGGAGTTTAAGAAACCTCATACAAGAAACTGACCAACCTGAGCAATTTCTGAAAGATATA CTCAAAGATCTGTGTGTCTACAATAACAAAGGAGCTAATCAAGGCACATATGAACTGAAGCCGGAATACAGAAAATCTGGCGATTAAGCAAGCCTCTAAA TAAGTTTTATTGATTGATACTGATCAATTTGTTAACTTCCTTCTCCTAATATATATAGTTTACTAATTCCAGTGTTTTTCTTCTTTTCCTGTTAGTTCAA GTTGCAAAATGGAGCAGTATGCATCCTTTTGACTAGGGTAAGGTTGGAGTGAATTTTAATGCCATCTGCTATTTTCAGTGACTAGGATAATAAGATAAGG TTGTAGTAATGTAACTTCAACTTTCTGTTCTGTTCAAAATTGGAATGTTTTTCATGTGCTTGAATCTTTTTTTCCCTAATTAGCAAGTGATTGCAAGATG TTTAACATATAAGTGTATTAA BLAST |
Tissue | pods |
Gene name | LI_gene_144384; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365367
Blastp | General transcription factor IIF subunit 2 from Bos with 28.51% of identity |
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Blastx | General transcription factor IIF subunit 2 from Bos with 30.77% of identity |
Eggnog | factor iif(COG5090) |
Kegg | Link to kegg annotations (509259) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459446.1) |
Pfam | Transcription initiation factor IIF, beta subunit (PF02270.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |