| Id Trinity | TRINITY_DN46399_c2_g6_i7 |
|---|---|
| Name Transcript | Ll_transcript_365381 |
| Sequence | TATTGGTAAAGGTTATTTTGTTAATGACATATAATAGACGCATTATACATTTATACATACACATCAAGCACTAACAAAACCGTTTCGGTTCTTCTCCCCG CCACAATTTCCGCCTCCGCTTCGTTATGGAGGAGCAAGGTAGCAGCAATATGAACACGAAGCAGCACCATAACCAAGGCACCACCACCACCACCAATAAC AACAATGCCTATGTTGACACAACGAAAGCAGAGAGAGCTGTGTGGCTATTGAAGTGCCCTTCCATGGTTTCTCGCTCCCTCCGATCTTCACCTTCTGATG ATCCTTCTCTTCCCATTGCTAAGGTTGTTCTTTCCATTGATCCTCTCAATTCTAACGATGATGATTCTCCTCAGTTTACTATGGAGTTGGCTGGAACTGA AGCTGGGAACATACCCAAATGTTATGACATGGATATGACTACAGACTTCATTCCCATGTCCGTATTTTCAGACACACCACAAGGAAAGATCTCTGTAGAG GGAAAAATACTGAACAAGTTTGACATGAGGCCCCGTAATCAAAGTCTTGAACTCTATGGGAAACTCTGCCGTGAAAGGACAAACAAATATATGGTCAAAA ATAGACAGATACAGGTTATTGACAATGACAATGGTGCTCATATGAGGCCAATGCCTGGGATGATCATTATGGCTTCTGCACCAAGTGTAAATGGCTTATT CTTCATCCTGACCAATTTCAGTTTGTCAAATGTTTTCTTTTTCTTGTTGCTAATGAGATAAAAGGACAGCTTATGTTTCCATTCCCTATATAAAATACCA AAGCTATGGATTATAGGTGTATAGCTGTAAGGAGAGGGGGTGAAGAGGTGGTTGAGGGCTTCATATTACTAGGCTTATTCAGTTTAATGTATGTGTTTTT TCTTTAATTTTACTTCAGATGCAACTGAAGATTTTGTTTTGTGGATTAGGATAAGAAGAAAACTCCAGCCAGAGGAACAGAAATGAAGAGAACAAGAAGG GACCGAGGTGAGATGGAAGAGATTGTGTTTAAGCTCTTTGAACGACAATCAAATTGGAGTTTAAGAAACCTCATACAAGAAACTGACCAACCTGAGCAAT TTCTGAAAGATATACTCAAAGATCTGTGTGTCTACAATAACAAAGGAGCTAATCAAGGCACATATGAACTGAAGCCGGAATACAGAAAATCTGGCGATTA AGCAAGCCTCTAAATAAGTTTTATTGATTGATACTGATCAATTTGTTAACTTCCTTCTCCTAATATATATAGTTTACTAATTCCAGTGTTTTTCTTCTTT TCCTGTTAGTTCAAGTTGCAAAATGGAGCAGTATGCATCCTTTTGACTAGGGTAAGGTTGGAGTGAATTTTAATGCCATCTGCTATTTTCAGTGACTAGG ATAATAAGATAAGGTTGTAGTAATGTAACTTCAACTTTCTGTTCTGTTCAAAATTGGAATGTTTTTCATGTGCTTGAATCTTTTTTTCCCTAATTAGCAA GTGATTGCAAGATGTTTAACATATAAGTGTATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144384; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_365381
| Blastp | - |
|---|---|
| Blastx | General transcription factor IIF subunit 2 from Xenopus with 41.79% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459446.1) |
| Pfam | Transcription initiation factor IIF, beta subunit (PF02270.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |