Ll_transcript_390604

• Id Trinity: TRINITY_DN46402_c0_g1_i1
• Name Transcript: Ll_transcript_390604
• Sequence: AGATGAGTAAAGAATAAAGGTTGACACTTGAGATGAGTGAAGAATAACATCATGAACAACATTGAGAACACTTATAAGTTATAGCAGAGAAAAAGAGAAG AAAAAAGCTAGTATAGTTTGCTCCGTCCATTTTCGTAGAGAGAAAAAAAAATGGCTGCAATTTCATCATTCTCAGCTTCCTTTTCAGTTCGTTCGGATAA GCCCTCATTCTCAACTTCACCCTCAATTTTCTCCTCATCACATCACTTTCTCCCCAAATTTCTTCATTTCCCTCGCATTTTCGTTTCCCCACTTCCACTT CAAATTTCATGCAATGCCTCTTCCACTGTTTCCGTTCAATCCACTTCCCCCACTGCAAAAACTGAGCTGAAAGATTTTCTTCACATAAATGATTTTGATA AGGACACCATTTTGAGGATCTTAGATCGTGCCATTGATGTCAAGGCATTAATTAAATCAGGGGACAGATCATTTCAACCATTTAAAGGGAAGACAATGGC AATGATCTTTGCCAAGCCATCCATGAGAACACGTGTTTCATTTGAGACTGGATTTACATTGTTAGGTGGCCATGCTATATATTTAGGACCTGATGATATC CAAATGGGCAAGCGAGAGGAGACTCGTGATGTTGCTCGTGTCTTGTGCCGCTATAATGACCTTCTTATGGCTCGCGTTTTTGCTCATCAGGACATACTTG ATCTTGCAAAGTATGCAACTGTTCCAGTTATTAATGGATTGACTGACTACAACCATCCTTGCCAGATAATGGCTGATGCCCTCACTATGATCGAGCACAT TGGTCGGTTGGAAGGCACCAAGGTTGTCTATGTCGGAGATGGAAATAATATTGTCCACTCATGGCTGTTGCTGGCATCTGTTGTTCCATTTCACTTCGTT TGTGCTTGTCCAAAGGGCTTTGAACCCGATGAGAAAGCAGTTGAGAAGGCAAGACAGGCTGGAATCAGCAAGATTGAGATAACTAATGACCCTAAAGAAG CTGTCAGAGGAGCTGACGTTGTTTATTCAGATGTCTGGGCCAGCATGGGGCAAAAGGAAGAGGCTGCATATCGTCGCCAAGTATTTAAAGGATTTCAGGT GGACAAGACTCTTATGGATATAGCAGGCTCAAAAGCGTTTTTCATGCATTGCTTACCAGCTGAAAGAGGGGTTGAGGTGACTGATGAAGTTATTGAAGCC CCAAATTCGATTGTGTTCCAACAAGCCGAGAACCGATTACATGCACAAAATGCCATAATGCTTCATGTGCTCGGCAAGTAAGTGGTTAGCATGGTGGAAG ATCTCCTTGTCAAAAATAATACTCTTGGTTTAAATGTGTAAGCTTAATCTTAAAAGTTAGTATTTCCAGATGAGACTATATAGTAACTTCTGAAGAAATG TAGAGACGAATGTAAGCTCAGGTTGTTTTCTTCGTATCTTAGTTTCCTTTTTGTTTTGCTTTTCTGCCATATTTTCAACTATCATGATCATGTGACACAT ATTTTGTCGTTTTGATGGTCATTTCCTTTGATTCTAGCTTAATTAGAGGGTTTGAGTCCTAAGAAAGCAATTGAGTTAAATACTTAATAAGGAGAAATTG TTGATCTTGTGTTCCTGCCCTACTCCAATTTAGATTAGTTTGTATTTTTATGGTTACTAAATACTAGATAGTTTATATCTCAGAAAATTCAGTGGCTTAT GTCTATCAGATTCATTTGTTTATTTTTAGGTTGGGGTGTTGTTAATGAATATGATTTATAATAAAACATTAGGTTGGTTGTTGTTGGGGGTGTTGTGTTG TATGACAGTGTTAAATATGAGATTTTGTATGGTTTAGATGTG
• Tissue: pods
• Gene name: LI_gene_144399;
• Additional information: details;

Expression of Ll_transcript_390604

FPKM

• PAB: 1.4
• PNAB: 21.8
• PS1: 23.6
• PS2: 25
• PS3: 22
• PW1: 18.4
• PW2: 7.8
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390604

• Blastp: Ornithine carbamoyltransferase, chloroplastic from Pisum with 84.71% of identity
• Blastx: Ornithine carbamoyltransferase, chloroplastic from Pisum with 85.37% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443211.1)
• Pfam: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain (PF02729.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;