| Id Trinity | TRINITY_DN46402_c0_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_390609 |
| Sequence | CCGTGTTTTTGCTCATCAGTTATGCTGGTGAGTTTACTTATATTTCACATGGTTTTTGGTAAGCATGACTAGTATTTGTAGATTACTTTTTATTTATCTG GATATGCATATTACATTTTCAATTGAGATTTCATTATGTCTGGATATTTTTTGCATTACTTTTTATTGGATCGGGGTGAAGTATGTTTTCTGATGTTCTC CCCCTTTAAATGTCTATGTATACATATAATACTTAAGAAGCATCCATGAAGCTTAGCTGCTTGCACATATGTGCTGGCAGGATTAACTTTTCTTATGGAA ATGAGTTTCTCAGTCGACATTGCAACCCTTCCTAAGTTGGAAGACTGTACATGCAACATGACATTTAAATGGTTCTGAAGAATGATTAGATGGCTTTACT ATTTGCTGCTTCTACCACTTGGTGTGTGGTGTGCCATTGGGTTATTGGGTTGTGAGATGAATTGTTTATCTGCTTTGGATGTCATTCATCATCTTGTCAA TAATCACGTTACTTTATATGTGTTATTGCAGGATATACTCGATCTTGCAAAACACGCAACTGTTCCAGTTATCAATGGATTGACTGACTACAACCATCCT TGCCAGATAATGGCTGATGCCCTCACTATGATTGAGCACATTGGTCAGTTGGAAGGCACCAAGGTTGTATATGTTGGAGATGGAAATAACATTGTCCACT CATGGTTGTTGCTGGCATCTGTTATTCCTTTTCATTTTGTCTGTGCTTGCCCAAAGGGCTTTGAACCTGATGAGAAAACTGTTGAGAAGGCACGGAAGGC TGGAATCAGCAAGATTGAGATAACTAATGATCCCAAAGAAGCTGTTAGAGGAGCTGATGTTGTTTACTCAGATGTCTGGGCCAGTATGGGGCAAAAGGAA GAGGCTGCATATCGTCGCCAAGTATTTAAAGGATTTCAGGTGGACAAGAGTCTTATGGATATAGCTGGCTCAAAAGCATTTTTCATGCATTGCTTACCAG CCGAAAGAGGGGTCGAGGTGACCGACGAAGTTGTTGAAGCCTCGAATTCAATTGTTTTCCAACAAGCTGAGAACAGACTACATGCACAAAATTCCATAAT GCTCCATGTGCTTGGCAAGTAACTGGTTAGCATGGTGGAATAACTCCTTGGCTAAAGTAATACTCTTTGTTTGAACGTTTTAGTTTAATTTACAAAAATC GTATTTCCTTATGAGACTATATGATAACAGCTGAAGAAATATGGACTTGTATGTAAGCTCATACTTTTCGTTTCTTACTTTCTTTTTTTATTTGTTTTTC CGCCATATTTTTGAACTATCGGTATTATATATGAGACATTTAGTCATTTTGATGATTATTGTGGCTTATGCCTATCAGATCCATTTTTTCGGATGTGATT GCCTCAATGCTGGGAGTGTTGTGTTGCAGTGTGAAATATAGAATATTTTGTATGGGTCAGATGTAATATGTTAGGCGAAATAAAGATGCAAATTTATACA AAGTTTGATTATATCTTGGATGTTATAATAAAGAAATGGATTTTATATACTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144402; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390609
| Blastp | Ornithine carbamoyltransferase, chloroplastic from Pisum with 89.85% of identity |
|---|---|
| Blastx | Ornithine carbamoyltransferase, chloroplastic from Pisum with 89.85% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458808.1) |
| Pfam | Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain (PF02729.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |