Ll_transcript_390220

• Id Trinity: TRINITY_DN46404_c0_g1_i5
• Name Transcript: Ll_transcript_390220
• Sequence: CCTCCCTCACCCTCTCTTCTCTTCCCTTCTCTTCTCCTTTTCTTCACTCTTCTCTTTATTTCCAATGGAGTAAGATAAGATAATAGGAGAAAGAAGAAAA AACTTCACTAATAATGGACTAGAACTAAGCATTTTCTTCTATGCCAAGAAGGAATTGGATATTGATAAGCAAACAGTATTGATCTGTAACTTTCTGTAAG GGACTGAGAAAGGATGCCAAGCCAGCTATGGTTTGCACTGCCAATGATTTAAAAGAATGGGAAGATTTTCCTAAGGGACTAAAGGTTCTTCTCCTTGATG ATGACATTGATTCGGCGTCCGAGATACGTGCAAAACTTCAGGCCATGGACTATAATGTTTCTACATTCTGCAATGAGCATGAAGCCTTGTCCGCAATCTC AAGTGGACCGGAAGACTTCCACATTGCCATAGTGGAGGTGAGTACAAGCAATAGCCTTGGAGGTTTCAATTTTCTTGAAAATGCCAAGGACTTGCCAACC ATTATGATTTCAAACAACCATTGCTTGAACACCATGATGAAGTGCATAGCAGTAAGATATTGATTAACCCGTCCCAATTATTTATAGGTTTATATCTGAT TAATATTATTTGAGCTAACTCATTTTCTATTTCATTTTTGCCTTTTTTTGGCATTATGTTTATTCATGCGTTTGGTTCTTTCAAATTATAAAGCAACATT TACCTTTCCCTTAAAGTTAGTGCACTAATGGAATCATTTTTAATCTAATTTTTAAATTTCATATCCCCTGACTATGTTTCATTACTCATTAGACTGAGTA CATATTCCTTCGGTTCTGGTTATTAATGGAAATCTCTTCACTCTTTATTACATTTTCTTTTTTAAGCTTGGTTCAGTTGAATTCCTAAGCAAACCACTCT GTGAGGACAAGCTCAGAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAATGCTGGAGCAAGTGTCGAATCTGAATCACTAAAACCTGTCAATGAATC TGTAGTGTCCATGTTGGAGCCCGGAAAAGGCAATGGACAAAATGAAACTACAATATCAGTTGATTTGGAGAAAGCATCCAGCTTTACTGATAATGATACT GAGCAGTCTACTGGAAGTGATAAGTATCCGGCTCCTTCAACCCCGCAATTGAAACAAGGAGCAAGGTTACTGGATGACGGTGATTGCCAAGAGCAGACTA TTTGCTCAACAGAAAAAGAAAGCAGTGAGCTTGATGGAGAATCTAAATCTGTCGAAACTACGTGTGGAAATTTGAATGCTCAAAGTACTTCACAACAAAG GGAATCCGAGAAGATTCCGGTTAAGAAGGAAGATGATCTTGCCAACCAATCTAAGGATGAGAGTGGAAATGCTGTTTCTTCACATCCGTGTAATGTAAAG GTTCAAAGCAAGGCTGATAGTAATAGAAAATCTCCAAAAAAGGTCGGGGTTCTCAGTAATTCATGTGAGAAAAAGGGTAATCGGAAGAAGATGAAAGTAG ATTGGACACCAGAGCTGCACAAAAAATTTGTGAGGGCTGTGGAACAACTAGGCATTGAACACGCCATTCCTTCTCGAATATTGGAGCTAATGAAAGTGGA GGACTTGACAAGGCATAATGTAGCAAGCCACCTTCAGAAATATAGAATGCATAAGAGACACATCTTGCCTAA
• Tissue: pods
• Gene name: LI_gene_144407;
• Additional information: details;

Expression of Ll_transcript_390220

FPKM

• PAB: 0.7
• PNAB: 0.1
• PS1: 2.7
• PS2: 4.7
• PS3: 1.4
• PW1: 1
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390220

• Blastp: Two-component response regulator-like APRR2 from Arabidopsis with 48.99% of identity
• Blastx: Two-component response regulator-like APRR2 from Arabidopsis with 46.67% of identity
• Eggnog: Transcription factor(COG5641)
• Kegg: Link to kegg annotations (AT4G18020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430481.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;