| Id Trinity | TRINITY_DN46407_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_391294 |
| Sequence | ACTAAATTCCCATTGCATATTGTGTTAGCTTTCAAACATAACTTTTAACATTTTTGGATGGGCCGGGTCGAATAAAACCCGCCCCATTGTGAAGTGAAGA ACATAGAAAAAACCCTTCCTTCTAACAATTACTCTTTTTCTGTTCAGATAGAAGAGAAGAAATCAGGCATGGCATCGTTTGGGTCTCTGAAATCCGCCAT TTTCGAAAGAGAAGAGAGAAAACAGCAGTACCAGGCACATATTCGAGGCCTCAATGCATACGATCGCCACAAAAAATTCATCAATGATTACGTTAGTATC TATGGGAAAGAGAAACATTCAACCTTAAAGTTGCCTATTAAAACAGATCAAGACACTCTAAGAGAAGGATACAGATTTATACGCTCTGAGGAAGATGACA TGGATCCGTCATGGGAACAAAGGCTGGTGAAGCGTTATTATGATAAGCTTTTTAAGGAGTATCCTTTCCAAAAAAATATTTTTTTTCAGTAGAATTATTT ATGGGGTGCTGCCAGTGCTGGTTTCCTCTTCTTTTTTAATTATGTGATATGGGTATTGAATTATAAATTTTGGTTAATAGAACGACTGTGTATAATGTGC ATGTAAATATGTAATAGCTAATGCAACACAGTCAGTGTTGGTTTTACTAGATTTTGCATTCCATTATCCAAGTCCGCCCCTCCTCCATAAGGTATCCCAT CTAAAAATTTTATATGAAACAAAATAAGAAGTGATTATTGAAATTGCTTTGGTTCATGTTTAATTAGGCATCACAGTGGTGGAGTTTGAGTGCCTAGCTG TAAACATCGCACTTAAACTCTACATTCTTTCACAACTTTTTGGGTTTTTTCCCTCCCGGGAGTTGAGTGAGGCTGTAATCTCTCTTCTAATAGCAATAAG ACTAAGTACATACTTCTATTATATATGTGATCTATCATTCCGGACAATCCTATCATTATTGTCCCATGCAATGAATGCTTGTTTTGCTTATGATACACTT CTTTATCTCTTTGATTTATTTGCCAATGTTCTCCTGCCTGATTAGGCATCTCATACACTGAAGTTTGTGAATAGTGTATCTGATAAATCTTGGTTGATTT AATTTATGCACATTGACCATGAAAGTAGTTGTAGCCCTTAATGTTTTGATCACAGGTTTGTTATTGGAAGAAAAGAAAGTTATTTATGTGTTTTAATGTG GTTCACCAGAAGAACTTTATTAGCCAAAGAAGCCACTAATTTTGCTCTGCTATTGAATTTAGTTGTACCAGTTGGCTTGTTACCTTAAATCATTTTAAGA TACTGTATTGCTGACATGTCACAGTACAAGAGTGGCAAGGTAATTACTCGTTACCTTTATAGTAGTCTCTGTTAGATTGTAAACTATTGCACCTTTTTAT GCTTATTTTTATAAAGAAAACAACTGTCTTGAATATTAGGATCCGTATCAATTGAGCTCGTCATGAGTTTACTTCTTCATGCCTTTGATTGAGTCATTCT GTGGAACTTGTAGAGGTGAAGCAAACACATTGTAAATGACACAATTTATTCAGGGCTCAATTGATGATGCCGACCCTATCTCTTTTCATGATAAAAGTAA TGTTCAATTTATTTGTATTTAGTTTCGGTGATTCACATTTACACCTAAGGGTCAGAATTTATAACTAATTCCTCTACCTTTCTGCCTAAATGGTGAGCTG GGTGCTACTTGACCAAGAAAGTCTCCTGCTTTGGTTTATCTTAGTGCATTATATATTTCAGATTGGTCTCAGGTGGAGGGCAGAGAAGGAAGTCAGATCT GGCAAGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144416; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_391294
| Blastp | Protein FRA10AC1 from Homo with 46.88% of identity |
|---|---|
| Blastx | Protein FRA10AC1 from Homo with 43.93% of identity |
| Eggnog | Fragile site, folic acid type, rare, fra(10)(Q23.3) or fra(10)(Q24.2) candidate 1(ENOG410YN91) |
| Kegg | Link to kegg annotations (118924) |
| CantataDB | Link to cantataDB annotations (CNT0000357) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449595.1) |
| Pfam | Folate-sensitive fragile site protein Fra10Ac1 (PF09725.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |