Ll_transcript_390212

• Id Trinity: TRINITY_DN46409_c0_g1_i11
• Name Transcript: Ll_transcript_390212
• Sequence: GGACTCTCTTGAAAAGGGTGTTCCACCAAAAAAATCAGCACGACCTTGTTTATAAAGTGAATAGTATAAATACATTTTCTGTCATTCAAAAAGTGGATAG ATAGTATATATATTTTCATAATCTTTGATCTCTTTGACGCATAAAGTGGCACCATATTCATCTTCAATTAAAGCCAAATCATATATTGGTATATATTCCT CAGATTAAAGTCCAACGGAAAAATGGGATTTAGATTTCAGCGATGTGTTCGGAGGGCCACCGAGACGGTCGTCGGTTAACTCAAACAGCGGCGAGGAAGG TCCGTCGTCTACGGTGGTTGGGGATTATTTCTATGATGACATATTTGGAGGAGATGAGTCCCCGAGGAAGCATAGTTCTTCTTCTCTTCCAGCTATGTTC AGCTTTCCTACCAAATTGACAAAAGGCTCTGACCTTCCAACATTTGGTTCCCCTACTAGGACTAAGACCCCTCTCAACAACAACATCAAGGAACCCTTTG GTGCTTCAGATTCTCACCTATCTAGGAATGATTCAAAGCAACCTTACCGGAAAAGTCTTCTATCACAAGAGTTTTCAGACATGAGCATATCTGATAAATC AGACAAAGGAAGCAGCAACATGAAACAAGACCCATCTGCTCCTAAAGTTTTTGCTAATGCCAGCAATGGCCAGTTTCATTTCTCGATATACAAATGGGCC AGTAAAGGGGTGCCATTGGTGATGCCCCTTAGGGCTGACAGAAACTCAAGGACAAAAGATAAGCATAAATTTGGGAGATGCTCTAGTGCTAAGGAATGGA TTGTCACTGAGATTACCACAGAAATGGATAGTCCTATAGCATACAATGGTTCCTCCTTAACAATAAACAGAAAGCAAGATAGTTCAGAGGGGGCAGATTC TCACCAAAATGTAGAACAAATAGCTTCTGGTAATGCTAAATCAGATTCCTTGAGTAGCCTTCAAACTGTTACTAAAGGTCTTCCTGGTAGTCCTATCTCA GGTGATGATAGAGCAGAATCAAGTACTCATTCTATAAGTGAAACTCCGAAGTTTGAGTCCAAACCATTACATTCTCAGTTCAATGGAAGTGATCAGCAAC AAGAGAGTAATGAGATGACAAGAAGGGGGAGAGGAGAAGAAAGCAAGATGAAAGGCAAAAAAAAATCATCTGCAATTTTAGATGCTACAGTGAATCCAAA GAATAAAAAAGAACAGACAAATTCCTTGAAAAGTGTAGAACATAGCAGAGCTACTTCCCAAAGTTCATTAAGCTTAGGGGAGAATATGGGAAAAGGCAGA GTAAAAGGAAAGGTCAAAGAATTTGTTCGAATTTTCAACCAAGAATCTGTAAGAAAACCCAGAGTTGACTCCGAATCCCGACTTCCGGATCCAACTTACG AGGAGCAAAGTGCTTTGAAGACAAAGAACGAAGTGGAAGCTGGACACTTCAAGAAGGAGAACTCCACCTCAGAGCTCACCAATGTCTCTGCAAATAATTT GTCACAGGAAGATGATATCTCAGAAGCAGCAACTCCTGATATTTCATTCACCGTGATCGGAGATAAAGACGGGTCCTTCGATGGGAATTTCATGATACAA GTACTATCCCAAGATGAGAATGAAGTCCTTCAAAACCAAGAAAATGAAGAAAACCAAGCCATTGACAAAAAGATACAACAGTGGTCTAAAGGGAAGGAAG GAAACATACGCTCACTACTATCAACACTACAATATGTACTTTGGCCCGAGAGCGGCTGGAAGCCGGTGCCCCTTGTTGATATAATTGAAGGGAATGCAGT GAAAAGATCATATCAAAGAGCTTTACTCTGTTTACATCCAGATAAATTGCAGCAGAAGGGTGCTGCTTCACATCAGAAATACACTGCCGAAAAAGTTTTC GATATTTTACAGGAAGCATGGAATCAATTCAATATGGTTGGTGCACTATAATATCAACCAAAAACTGATAAAGGAAAATCTCTCGTTTATACCTCAAGAG AAACTTCCCTCTACAAGTCTTTCAATAAGGGGATTGATCTTGCTATTATTGGAAATGCAAGTATACATGTATAATTTCCTTTTCCTGATATGCCTACATT AGTTGTTGTTTTTTTCCACTGCACATTTGTCAACTTTTACTTGTATATGTACATCTACCACATAATAAACATACCGTGTAAATTACCTTGTTAAGGTTAA GACTTGGCAATAGCCTGATACAATGGTAACATACTAACATTTGGTAGAGGCA
• Tissue: pods
• Gene name: LI_gene_144421;
• Additional information: details;

Expression of Ll_transcript_390212

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.5
• PS3: 0.3
• PW1: 0.6
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390212

• Blastp: J domain-containing protein required for chloroplast accumulation response 1 from Arabidopsis with 34.9% of identity
• Blastx: J domain-containing protein required for chloroplast accumulation response 1 from Arabidopsis with 33.75% of identity
• Eggnog: UBA TS-N domain protein(ENOG410YGT5)
• Kegg: Link to kegg annotations (AT1G75100)
• CantataDB: Link to cantataDB annotations (CNT0001715)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417279.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;