| Id Trinity | TRINITY_DN46409_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_390205 |
| Sequence | CATCATCGCTACTACTATTATTCACGTTCACTCATATTTGTGGCTTCTCTCCTTCGATGCAGAGTCCAACGGAAAAATGGGATTTAGATTTCAGCGATGT GTTCGGAGGGCCACCGAGACGGTCGTCGGTTAACTCAAACAGCGGCGAGGAAGGTCCGTCGTCTACGGTGGTTGGGGATTATTTCTATGATGACATATTT GGAGGAGATGAGTCCCCGAGGAAGCATAGTTCTTCTTCTCTTCCAGCTATGTTCAGGACTAAGACCCCTCTCAACAACAACATCAAGGAACCCTTTGGTG CTTCAGATTCTCACCTATCTAGGAATGATTCAAAGCAACCTTACCGGAAAAGTCTTCTATCACAAGAGTTTTCAGACATGAGCATATCTGATAAATCAGA CAAAGGAAGCAGCAACATGAAACAAGACCCATCTGCTCCTAAAGTTTTTGCTAATGCCAGCAATGGCCAGTTTCATTTCTCGATATACAAATGGGCCAGT AAAGGGGTGCCATTGGTGATGCCCCTTAGGGCTGACAGAAACTCAAGGACAAAAGATAAGCATAAATTTGGGAGATGCTCTAGTGCTAAGGAATGGATTG TCACTGAGATTACCACAGAAATGGATAGTCCTATAGCATACAATGGTTCCTCCTTAACAATAAACAGAAAGCAAGATAGTTCAGAGGGGGCAGATTCTCA CCAAAATGTAGAACAAATAGCTTCTGGTAATGCTAAATCAGATTCCTTGAGTAGCCTTCAAACTGTTACTAAAGGTCTTCCTGGTAGTCCTATCTCAGGT GATGATAGAGCAGAATCAAGTACTCATTCTATAAGTGAAACTCCGAAGTTTGAGTCCAAACCATTACATTCTCAGTTCAATGGAAGTGATCAGCAACAAG AGAGTAATGAGATGACAAGAAGGGGGAGAGGAGAAGAAAGCAAGATGAAAGGCAAAAAAAAATCATCTGCAATTTTAGATGCTACAGTGAATCCAAAGAA TAAAAAAGAACAGACAAATTCCTTGAAAAGTGTAGAACATAGCAGAGCTACTTCCCAAAGTTCATTAAGCTTAGGGGAGAATATGGGAAAAGGCAGAGTA AAAGGAAAGGTCAAAGAATTTGTTCGAATTTTCAACCAAGAATCTGTAAGAAAACCCAGAGTTGACTCCGAATCCCGACTTCCGGATCCAACTTACGAGG AGCAAAGTGCTTTGAAGACAAAGAACGAAGTGGAAGCTGGACACTTCAAGAAGGAGAACTCCACCTCAGAGCTCACCAATGTCTCTGCAAATAATTTGTC ACAGGAAGATGATATCTCAGAAGCAGCAACTCCTGATATTTCATTCACCGTGATCGGAGATAAAGACGGGTCCTTCGATGGGAATTTCATGATACAAGTA CTATCCCAAGATGAGAATGAAGTCCTTCAAAACCAAGAAAATGAAGAAAACCAAGCCATTGACAAAAAGATACAACAGTGGTCTAAAGGGAAGGAAGGAA ACATACGCTCACTACTATCAACACTACAATATGTACTTTGGCCCGAGAGCGGCTGGAAGCCGGTGCCCCTTGTTGATATAATTGAAGGGAATGCAGTGAA AAGATCATATCAAAGAGCTTTACTCTGTTTACATCCAGATAAATTGCAGCAGAAGGGTGCTGCTTCACATCAGAAATACACTGCCGAAAAAGTTTTCGAT ATTTTACAGGTAAAATATCTCAGTGGCTACTTATTTGCAGTACAATCATTCTGTTAACAGTTAGCGATCGAGATCGAGATTTATGTTCTACGCATTCGTC TTCCTTAGATACGTAAGTTAGAGAGCTAAAGAGTTTGCAAAACCTCACATTTCCAACTTTTTTAGGATTTCCACCTGCTTAATTTCCTAGTATTATTATT ATTATTCATTGCTAAGTGCTAACCATCAAATAGTATGTGTCCTCAAAATGATACACTCACATATGATATATAGATATACCTTAACAACTTAGTGATGGCA GCAAACCTCAGAAGTGGATTACAATATTTGAGTTACTATATTTTACACTACAGGAAGCATGGAATCAATTCAATATGGTTGGTGCACTATAATATCAACC AAAAACTGATAAAGGAAAATCTCTCGTTTATACCTCAAGAGAAACTTCCCTCTACAAGTCTTTCAATAAGGGGATTGATCTTGCTATTATTGGAAATGCA AGTATACATGTATAATTTCCTTTTCCTGATATGCCTACATTAGTTGTTGTTTTTTTCCACTGCACATTTGTCAACTTTTACTTGTATATGTACATCTACC ACATAATAAACATACCGTGTAAATTACCTTGTTAAGGTTAAGACTTGGCAATAGCCTGATACAATGGTAACATACTAACATTTGGTAGAGGCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144421; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390205
| Blastp | J domain-containing protein required for chloroplast accumulation response 1 from Arabidopsis with 34.52% of identity |
|---|---|
| Blastx | J domain-containing protein required for chloroplast accumulation response 1 from Arabidopsis with 33.33% of identity |
| Eggnog | UBA TS-N domain protein(ENOG410YGT5) |
| Kegg | Link to kegg annotations (AT1G75100) |
| CantataDB | Link to cantataDB annotations (CNT0001715) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417279.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |