| Id Trinity | TRINITY_DN46411_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_391216 |
| Sequence | GGCCTCTCTATCGTGCTATGAGGTAAACTACATTGTCGCCTCCTTTTCTTTACAAACATTTAAACACTGCCTAAGCAAGCACACAAGATGTTAAACTGTC AGGCTTGGGGCCTATCTAACCTAATTAACCTAATTCGAACATAAGCAATGGGGTTGGAGCCTTGATCCAGACTGATCCAATCCAAACTTGACTGAATCTG ATCTGTCCGATAACCCAACATGCAAGCCAGACCCCAAACCTCAAGATCTTGGTTCAAAGTTACAGAGCTAGATTCAATTATGAATTCTACATGGTCTTGG TTTTGTTGAGAGTCAGGTCCCACATTTATTGACATTACAAGTAAAAGAGATCATTTATCACTTTTGTGATCCTCCAAGTGAGTTTACAAGAAGGTTTACA GAAGAAAGATCAAATGTTTCAATAGCTAGCTAATTGAGGTTAAGGGAAGGCTATTTATGGAGCCTGTGTATATGCAGAAACAAAGGAAGGGTGCTAGGGA ACTAACTAATTTTCCCGCCAATTAAATACTTAACTAATTGATTCAGATTACACGTGAAACTTGAGACGAGGACACCCAATTTGTGGAGCTAGTGTTCAGA AATCTGGATATTCAAAGTGACCCAATAATCCAATGGTCTTTGTTGATCCAACTTGACCCAATCTGATTGATGGTAGAAGCTGTAAAATTTTATACACTGG ATTATTTTGTACATGGTGATGGTTGTTGCTTATGGTTGTTTCTGGTATGCAGGACGGATAGCGCATTGAAGTTCACCTGGTTTTTCTTGTTCTACTTGCT TCACATTGCATTTTGTATCTTTGCCGCAATTGCACCTCCAGTTGTTTTTCATGGAAAATCATTAACGTAAGTTCTATAAAGTGTCTAGCAGAGTTTACTT AACTACAGTTTCATGAAGTTGCTGATCTCTTTAGTTGTTTGGTATTTGGTGTAATTTTAGAACAAAGTATACTTCAAAAGGCAAAGGGATCCTTGAGGAG AAATTTTAGACACTTGCCCTCTAGAGTTTACTCTGGTTTTATTTTCCCAATAATAAGCTGTCATTGCAAGCTGGGGAGAATATGTTTATAATTGGATGTT ACATACCAAAAAGCTATCAACTTAAATTAGCTTGCCTGGAAAACTTCATTTATGAGAAGCATAGGGACTTTAGAAAACAACACGACCTTTTACTCATTGT GTAGGCATGTGTATGCAGTAAAACATTATAGTGGGATTATCTGTTTATTGATAGTGTCTTGTCATATTATTCATGTTCAGGTGGGAAGGAATTGTCGTAG CTCTAAAATTTATTAAATTTACCTGGAAAGAACTTAAACACTATTGTTTTTTTATTAAAAAGTAGTTCATTTCCATTTTATGCTGTTATCTTATGGTCAC CTTTTTACTAAATCATATGTACTAGTAAATTTATTAATCAAGTACAAGTATATATTTCTTCTGTTACATTTGAAGTTTGAACTAATCCATTTAAAATTGC AGGGGCATCCTTGCAGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGTTTGTTTTGCTTGGAGTCTCTTCTAA GCCTGTGGGTGCTTCAGGTGAGGGATATATCATTTGAATGGATTTTCATTCTCAGTTTTCATATTGCTTCTGAGCAATGGGATAAATAAGACAAATTAAA ACAGCATGAACATTTAACTATGTTAGAACTGAAGGGTAAAATGGTATTTGCTTGGAGGAGTAAAGCGTAACAGCAGTTAGTTTAGAGAGGATCTTGTAGA TAAGTAACTATAAGGATAATAAGGGTTTGATGGAGATACGTGTTCAAAATGTGGGGACTATGCTAAGAACCTTTAACTCCAACTCTCTATATTGTCAAAT AAAGACACCAAGGTGTGATAGGAAGGACTGGTAGATTTTTTTATCAAGAAAAGGACTGAAAGAGGGTTGTAATTATCTTTAAGAAAGCTTGGTTGTAGAG AGGTTCTCATGGTAAAGAGCAGTCCACTGCATGAGTCTTTCATATATTGGGATTTGGGGAGGGTAGAAAGTAGAGGTAGATATATACAACTTTACCTGTA AATGTACAGTCTTACTCCTGCAGGCAGAGGCTGTTTTCACAAGAGAGGTTATAATTTTGAGTATGAAATGTGTGATTTTTGGTGTGCATTCCAAAAAGAA GGAAGGTGTACTGCTGTAAATTTTGTTTCATCTGGGAATTTTTCTTGATTCCGTATGAAAGATGAGTTCAATACCTTTATCCGGAATTATCTCCTTTTAA ATAATACTCTTGAACTCAATCATGAGTTGAAAGTTGAAACAACTGTTGCAGTTGATTAGCTAATTATCCTATTAGGAAAGTGGGGACTTTGTTATGTGCA TGATTTTACTTAAGCTGCTAGATTTGCCCATAACTTTTTTCAGAATATGTATTCGACATTATTGCTTGATGCTTATTTCCTTTTCTTTTGTGTGCAGAAA ATATACATGTATTTCCGAGGGCATAAGTGAGATTATTCTGAGGTTGTGATCCATCGGCTTTACTTCCCAGTTTGGCTTAAGTATATTCTTTCTCTTTTGT CTACCTTTTCTTTTCCCATACAATATCTTTGTATGATAGCGCTCCTTGTTACTCCGGCTAATGGGTGATTATACCAGAGTTTAGAGTGTACTGTGATGAC CTCTTTGTAGTATGTCTTCTAGAAATGAAAATTTGCTTTATATAACCATAAATGTATGTAATGGATTTTGAGTGAAGGATTAGTGTGTACTGATATTGAA GTTGTATTGTCGCCCCTCAAAGTTTATTAAATGACGATTTCTACTATTAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_144426; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_391216
| Blastp | - |
|---|---|
| Blastx | Secretory carrier-associated membrane protein 5 from Oryza sativa with 78.95% of identity |
| Eggnog | secretory carrier membrane protein(ENOG410XSJN) |
| Kegg | Link to kegg annotations (9266378) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445255.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |