| Id Trinity | TRINITY_DN46422_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_389953 |
| Sequence | AAGAAAGAAGAATGGATCCAATGGAAGCTCTGATAACACAAATCCAAGGCTTATCAAGTTCCGCCGCCGATCTCTCTCGCCTCCACACCATTCTTAAACA AGCCACCGCCGATGTCTCTCTCCGTTCTTACTCCGATCACCTTCCTTCTCTTCTCTCTAACCTCGATCCTTCTCTTCATTCCCTTGGATTCCTCTTTATC TTGTATCCTCTTTTTTCTATTTCTCTTTTCATTCATTTTTTGTTTTACTTTCTTCATTCTAATCCTTAACGTGTTTTATGTGTTCGCAGAGATGCATCCA TTGCTTCTCCGGTTTCGAAACCCCAGGCTGAGATATTTGTTCCAATTGTCACTACATTTATCGCTGCTTGCAGTGTTGAACAAATTCAATTGGCGCCTGA TAAATTTGTATCTGTGTGTAAGAAGTTGAAGGACCAAGTAGTTTTGTTGGAGGCTCCCATACGCGGGGTGGCTCCCATGTTAACTGCTGTTAGGAAGCTT CAAGTCTCCACGGAACGTTTGACTCCACTACATCCAGAGTTTCTTCTTCTGTGCTTGTTGTCAAAGTGCTACAAAACAGGTCTGGCAATATTGGACGATG ATATTTTTGAAGTAGACCAACCCAGAGATCTTTTCCTATTCTTTTATTATGGAGGCATGATATGCATTGGGCAGAAACGCTTTCAGAAGGCATTGGACCT TCTACATAATGTTGTAACTGCTCCAATGTCTTCATTGAATGCTATAGCTGTTGAAGCTTACAAAAAGTACATATTAGTTTCTCTCATTCGCCATGGACAG TTCTCTACCAATCTTCCAAAGTATTCTTCTTCAGTCGCTCAAAGAAACCTAAAGAACTTTTGTCAGCCTTACATTGAATTGGCAAATAGTTATGGCACTG GCAAAATTGCAGAATTGGAAGAGTATGTCCAGACGAACACACACAAGTTTGAGTCTGACAACAACCTTGGACTGGTTAAGCAGGTTGTATCATCCATGTA TAAGCGGAATATTCAAAGGTTGACCCAGACATACTTGACCCTTTCTCTCCAAGATATAGCCAACACAGTGCAGCTAAATAGCCCCAAGGATGCTGAAATG CATGTGCTACAAATGATTCAAGATGGTGAGATATATGCAATGATCAACCAGAAGGATGGAATGGTGAGCTTCTTAGAGGATCCTGAGCAATATAAAACCT GTGAGATGATTGAACATATTGATTCATCAATCCAGAGAGTAATGGCACTATCTAGGAAACTAGCTACAGTGGATGAGCAAATTTCTTGTGATCCCATATA CTTGTCCAAGGTCGGGAGAGAGAGACAGAGATATGACTTCGACGACTTTGACGTTCCACAGAAGTTCAACATCTAAGGCTAGGCCACCTGCTCCTAAAGG TTTCTATTATCTTGTGAGTGATGTAGCAGATTTGGTTCATTAATCTGCGTGTAGATTAGTTTCTGCTCCCAAATGGAAGAATTTTTCTGTGATTATAAAC TTTTGTTCTATTGGGAAGTAGCTCAGAGGATGCTCAATTATCTTTAGCTATAAACTACCTACACTTTTTTACTGCACTGTGTACATTTATGCCTGCTCTA TTGACCTGTCTAAACGTAGTTGCTATATGGGTGAGATCTCAAGTGAAATACTGAATGTATTTTACTAATCCTGTTAGGGTGTCAACTTTCTAGCTCTGGT AATTTATGAGAGTTATATGAGGGAAGAAATTACAATAGTATGATGTGGTGTGCTTGGTAACCATAATTTAAGGGATATACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_144476; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389953
| Blastp | COP9 signalosome complex subunit 3 from Arabidopsis with 69.77% of identity |
|---|---|
| Blastx | COP9 signalosome complex subunit 3 from Arabidopsis with 59.43% of identity |
| Eggnog | COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis(ENOG410XRKY) |
| Kegg | Link to kegg annotations (AT5G14250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427626.1) |
| Pfam | PCI domain (PF01399.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |