Ll_transcript_391268

• Id Trinity: TRINITY_DN46423_c0_g2_i2
• Name Transcript: Ll_transcript_391268
• Sequence: CAGAAATCAATTCCTTCCATTAAGGGATTCTCCAAAATCGCTTATCATATTCCATAATTCACTCACATTTCCTATGAGCAGTAATTTTTAACACAGGGTC CACATAGTCAATTCACTACCACTTCTCTGTACAAAATAAAACACCACCGCTGATTCTTTTTCACGACACCGTTTCATCCGACTCGTCCTCCGTTCCCTTC GCCGAACACCGTTACCTTCATTTTTCGGCCCCTTATTAATTGATTTCCATAATTACCCCTCCCTCTGGCTTTAAATTCCTTTTCGCACTACTCCAACACT GAAAATCGAAAACCCTTCGATTTCGATCGTCAGGGTTTTTCGTTTGTTCGATTATGGCGGATCGCGAAGACGAGGATTTGGAAATGGCGATTCGGATGAG TATGCACCACGCGCCGCCAGAGCCGAAGCGCAGCAAGCCGAGACACAGCTCCGTCGCTGTCGGAGTCGTCTCGGGGACGCCGGAGGAGTCAGTGGAGGCA AAGAGCCGGCGGATTAAGCGGGAGTTAATGGCAGCGGCTGCTGAAAAGCGTATGGCGGCGGTTGCAACGTCAAGGAGCAACTTGCCGGCGGCGGATAAAG GCGGTGGCGAGATTGGAAGGAGAGAGGAGGAGGAGGAGGAGCGAATGGCGATGGCCATGAGAAATTCGCCTTCGGCGATTACGGGTGGCGGAGAGGTTGG GAGGAGAAAGGAAGAGGAAGGCGAGGGGTTGATGAGTGTGGAAGAAGCGAATAAGTTATTTGTTATTGTGTTTGGAAATGAGGTCTCTAAGGAGATTCTT GCACAGTGGAGCAATCAGGGAATAAGGCGTTTGTTCTCAAGCATCTTATTTTCTTACATGATGAGTTGAAAGATGTATTAGCAATGGCTCGAAGCCAGGG TATGAGCACAATGATTAAAAATCAATCCCTTCCATCAAATGATTTTTCTTCACCCGCTGATGGTGTAAAAGTAAGTGCCCTTGTAAGAAGCATGGGTGAA ATATTATTTATGTGTGGAAGTAATGAAAGGGCTGTCATTGCAACTTTGAGCATTCTTGGGAGTGATATTCAGCAATCTGATGAAATTCCAACGGATGAGG TTATTGCAGAAGCACTTTCTGGTCTTTCAATTGAATCAGCCTTGGATCTGCAAAAAGTTCTTAGAGTAGAAACATACACATCCCAAGCAACTGCTTTGAA GAGGCTTCAAGCAATGATTCCCATATTCCATAGTCGAATGGGGGCGTTGCTTTTCCTGATCTCTGCTTTACTTTCTCGGGGACTGGACTTGGTTCAAACT GACAGGGATGATCCCAGCCTACCTCTGGTTACCGCTCCATTTGGGCATGCCTCCCAGGAAATTGTAAACCTTCTGCTCTGTGGGCAGGCTGTGCCTAATG TGTTTGATGGGAAGATGGATTTAGGAGAGGAAATGTTTCTAAAAGGTATATCTCAACATGTAGAAGTTGGATTTCTCACACTGCTAGAATCCCTGAATTT CTGCAAGGTTGGTCAGTATTTGAAATGCCCAAAGTGGCCTATATGGGTTGTTGGGAGTGAATCCCACTACACAGTACTGTTTGCTCTTGAGACCAGTGTT CAAAACGAGAATGAACTGGAGGAAAGGGAATCACAGATTCGCAAAGCTTTTGATGCACAAGATCAGAGCGGAGGCGGTGGTTTCATTAGTGTGGAAGGGT TCTATCAAGTGCTCAGAGAAACGGATATTAAACTTCCACAAGAGAAGCTTGAGCACCTTTGCAGCACAGGCTTCATTGTATGGAGTGAGTTCTGGCAAGT CATTTTAGATTTAGACAAGAGCTTGGGAGGTTTAAAGGATTCATCGGGACTGATGGGTAAGAAGGTTTTCGACCTCTACCATTTTAATGGAATTGCTAAA TCAGATCTTACTGGCAGTCATGTAAATGCTAGGGGTGAAGCTCCACTACAAAGACCCAGACTCACAAAATTGAGTGTTTCTGTTCCTCCAAGGTGGACGC CGGAGAAATTTATGGCAGACACGGCAGTTTCTTCTGCTACTAGTGCAAACGATTCTTCTTTGAAGGACACTGAAGTATCTAAACCCGAGCCTTCTCAGCA TGCACCTCTGGTAGACTGCATAAGAACGCGCTGGCCTCGTGCCGTCTGCAGCTGGTCAGGGGATCCTCCAAGTATAGTTTAAGGGGTTTACATGGAGTCA TTTGTCGCGGTTTTGTTGGTGTAACATAAAAATAATTGGTTGGTTTAGCAATGCAATAAGGAAGAAGAGATGAAGTTTTACTTTGATGTTGGAATTCAAG GCACAAACAGGGGTGAAGTATCCTTACTTTCTCAACTATGTGCTTAGCCATATTTATAATGTGGAGTGATGTATCTTAAACATTGTTTGTGATGTCATTC AAAAGGTTACAAGGAAGAGGGATGTTATATTTGTTGTGAAGTCAACTTGTAAAATCTATTTAAATGTACTATAGTCATGATTAGAAAAGATTTACTTCTT GGGAGATTATTAATAAACAAGAAGATCTTGCATTTAAAAATGTTGTAATACTAAATTATTTAGTGCTTGGCTTCTGAATAAGGTAAGTTGAATATTTATT ATATTTACAATAATATGATAAATTGTGAGTTTGGCGCTTTAGTTAGGTTGTTGGGTAGTGAGTCGATTTAAGTGGGAGACTCATGTATGAGCCG
• Tissue: pods
• Gene name: LI_gene_144480;
• Additional information: details;

Expression of Ll_transcript_391268

FPKM

• PAB: 0.3
• PNAB: 0.2
• PS1: 0.3
• PS2: 2.5
• PS3: 1.3
• PW1: 0.7
• PW2: 0.1
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_391268

• Blastp: Ubiquitin carboxyl-terminal hydrolase MINDY-3 from Bos with 31.93% of identity
• Blastx: Ubiquitin carboxyl-terminal hydrolase MINDY-3 from Silurana with 30.18% of identity
• Eggnog: family with sequence similarity 188, member(ENOG410XSGV)
• Kegg: Link to kegg annotations (538509)
• CantataDB: Link to cantataDB annotations (CNT0001500)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413527.1)
• Pfam: Domain of unknown function (DUF4205) (PF13898.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;