| Id Trinity | TRINITY_DN46423_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_391275 |
| Sequence | CAGAAATCAATTCCTTCCATTAAGGGATTCTCCAAAATCGCTTATCATATTCCATAATTCACTCACATTTCCTATGAGCAGTAATTTTTAACACAGGGTC CACATAGTCAATTCACTACCACTTCTCTGTACAAAATAAAACACCACCGCTGATTCTTTTTCACGACACCGTTTCATCCGACTCGTCCTCCGTTCCCTTC GCCGAACACCGTTACCTTCATTTTTCGGCCCCTTATTAATTGATTTCCATAATTACCCCTCCCTCTGGCTTTAAATTCCTTTTCGCACTACTCCAACACT GAAAATCGAAAACCCTTCGATTTCGATCGTCAGGGTTTTTCGTTTGTTCGATTATGGCGGATCGCGAAGACGAGGATTTGGAAATGGCGATTCGGATGAG TATGCACCACGCGCCGCCAGAGCCGAAGCGCAGCAAGCCGAGACACAGCTCCGTCGCTGTCGGAGTCGTCTCGGGGACGCCGGAGGAGTCAGTGGAGGCA AAGAGCCGGCGGATTAAGCGGGAGTTAATGGCAGCGGCTGCTGAAAAGCGTATGGCGGCGGTTGCAACGTCAAGGAGCAACTTGCCGGCGGCGGATAAAG GCGGTGGCGAGATTGGAAGGAGAGAGGAGGAGGAGGAGGAGCGAATGGCGATGGCCATGAGAAATTCGCCTTCGGCGATTACGGGTGGCGGAGAGGTTGG GAGGAGAAAGGAAGAGGAAGGCGAGGGGTTGATGAGTGTGGAAGAAGCGAATAAGTTATTTGTTATTGTGTTTGGAAATGAGGTCTCTAAGGAGATTCTT GCACAGTGGAGCAATCAGGGAATAAGGTTTAGCAGTGATCCAGAAACATCCATGGGTCTAGTGCAGCATGAAGGTGGGCCATGTGGCGTTTTGGCAGCTA TACAAGTAATGGTCCATTTTTCAGCTGCGCTTTGAACTTGTAGAATGATTGGTTCTAACTCTTGATTTTGTTTTGACATCCAATGTTTTCTGTTTTGAAA ACTGAATTGTTTATTTTAGATCTAGTACTATGTACATCAAATTTTGTTTCAATGTATAGTATTATTCTGAAACATGAACAACTAATTGTCCAAATTGTCA TTGACTGTCCATCTCAATAAAGAACCAGTTGTCTATTTTGAGATATAAGTATGTAATATCAATTAAGCATCCGAGAATGAGTTGTATGCAATTTTTTGTC ACAGTAGAAGTCTATGAAGTCAGACGGTAAGATTAGTACAATGGTGAGCTTGTTGCTTAGTGGCCATGAGGTTACGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144480; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_391275
| Blastp | Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 from Homo with 26.86% of identity |
|---|---|
| Blastx | - |
| Eggnog | family with sequence similarity 188, member(ENOG410XSGV) |
| Kegg | Link to kegg annotations (84182) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413527.1) |
| Pfam | Ubiquitin interaction motif (PF02809.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |