Ll_transcript_391276

• Id Trinity: TRINITY_DN46423_c0_g2_i6
• Name Transcript: Ll_transcript_391276
• Sequence: CAGAAATCAATTCCTTCCATTAAGGGATTCTCCAAAATCGCTTATCATATTCCATAATTCACTCACATTTCCTATGAGCAGTAATTTTTAACACAGGGTC CACATAGTCAATTCACTACCACTTCTCTGTACAAAATAAAACACCACCGCTGATTCTTTTTCACGACACCGTTTCATCCGACTCGTCCTCCGTTCCCTTC GCCGAACACCGTTACCTTCATTTTTCGGCCCCTTATTAATTGATTTCCATAATTACCCCTCCCTCTGGCTTTAAATTCCTTTTCGCACTACTCCAACACT GAAAATCGAAAACCCTTCGATTTCGATCGTCAGGGTTTTTCGTTTGTTCGATTATGGCGGATCGCGAAGACGAGGATTTGGAAATGGCGATTCGGATGAG TATGCACCACGCGCCGCCAGAGCCGAAGCGCAGCAAGCCGAGACACAGCTCCGTCGCTGTCGGAGTCGTCTCGGGGACGCCGGAGGAGTCAGTGGAGGCA AAGAGCCGGCGGATTAAGCGGGAGTTAATGGCAGCGGCTGCTGAAAAGCGTATGGCGGCGGTTGCAACGTCAAGGAGCAACTTGCCGGCGGCGGATAAAG GCGGTGGCGAGATTGGAAGGAGAGAGGAGGAGGAGGAGGAGCGAATGGCGATGGCCATGAGAAATTCGCCTTCGGCGATTACGGGTGGCGGAGAGGTTGG GAGGAGAAAGGAAGAGGAAGGCGAGGGGTTGATGAGTGTGGAAGAAGCGAATAAGTTATTTGTTATTGTGTTTGGAAATGAGGTCTCTAAGGAGATTCTT GCACAGTGGAGCAATCAGGGAATAAGGTTTAGCAGTGATCCAGAAACATCCATGGGTCTAGTGCAGCATGAAGGTGGGCCATGTGGCGTTTTGGCAGCTA TACAAGCGTTTGTTCTCAAGCATCTTATTTTCTTACATGATGAGTTGAAAGATGTATTAGCAATGGCTCGAAGCCAGGGTATGAGCACAATGATTAAAAA TCAATCCCTTCCATCAAATGATTTTTCTTCACCCGCTGATGGTGTAAAAGTAAGTGCCCTTGTAAGAAGCATGGGTGAAATATTATTTATGTGTGGAAGT AATGAAAGGGCTGTCATTGCAACTTTGAGCATTCTTGGGAGTGATATTCAGCAATCTGATGAAATTCCAACGGATGAGGTTATTGCAGAAGCACTTTCTG GTCTTTCAATTGAATCAGCCTTGGATCTGCAAAAAGTTCTTAGAGTAGAAACATACACATCCCAAGCAACTGCTTTGAAGAGGCTTCAAGCAATGATTCC CATATTCCATAGTCGAATGGGGGCGTTGCTTTTCCTGATCTCTGCTTTACTTTCTCGGGGACTGGTATGCTTCAGCTTTTCTAATTGCAACTGCCAGTCT TGAGACTTATCTCTGTCTTCTAAAGTGTGATATGCTCTGCATCTTTTTTATTTCCCTACTTCCCTTTTTTTTGTTTTTGTCAAAGTTTGCGAATGAACAT GCTTGTTTGAATGTCTTTTTGCCTGAATGTTAAATTTTCACCACATGTTTTGCACCATAAAGGAAGAATGTTGAGATGACTTGGTTAACTGGATTAGTGG ATCTGATTGTGTTTCTACTTTTTAATTGTTCCTATAGGGGTATTGACACAAATAGAAGTATATTTCCATTTTAAGAATGAATAGCTGTACACAGATCAGT TGTAATAGTATTCACTCTATAAATAGACCAAGTTAATCTCAGGTAAATGAATAAATTAGTTAACAGTTTCCTTTCTCTCTCTCATCTTAGCTTTCTATGT TTTCTTATAACAGTTCAATGAACTTAAAGGCAAAAACAGTTTGCATTTCATCCTTTCCTGCTTTTTGGTTATCAATATTATTCCTCTCTTTCTGTAGGCT TTAAGTCATGACTTATCTGGTTCCAATTAATAATTTCACCAAGCAATTAAACTATTCAGTCTACAAGGATTCATCTAAGGTTTGTAGGCAGTTAGATCTC CCTAATAATATCAGACTCATGATCCAACAGAACAGCATCACTACATGAGTTAAAATAACATTAAATGTATGTTTAGTCACAACCTCTGACTAGCATCACT ACATGAGTTAAAATAACATTAAATGTATGTTTAGTCACAACCTCTGACTAGCATCTCTAAGAAAATTGCAAAATTTCTTTGGAACTGGAAAAAAGAAGAA AGAAATGGGAAGATGATACCTTACATTTTATTATTCATCCAGTCAGTCCCGTGTCTAGCAAAGTTTGTAGTCAATGTTAAACCTGTTTGATTTAAAGTAC AAAAACAAACGAACAATAGAAAACATTGCAGTCCCATTTTCTATCTTTACTTAGAATGCAATGTGCGTATCATTCTCCTTTCTATCTTATTTGCCATGTT TTTTTATTGTGCTTAAAAGCTGTGCTTATCAATATGAAAATGAGTCATATATTTCCTCTCAATTGTATGCCCTTTTAGCTTGTGAGCTGTAGCATGAAGC TAAATCCAGAATTGATATGTCTATCCTAATCTCTTCTAAAATTTGAGGCTCATGTTGTAGGGCCTGCTTGATATATTTGCCTTTTAAAATAATTTTGCAA TGGGTGAGGTCTCTGTGTATGGCAATGAAATATGGCTGACATCTCTGCCAACGTCACATGTAATAGCTATCATTATTTTCCTTTTAAAATAATTTTGCTT TTACTCTTAAATTTGTAACTGCCGGACATAAAGTGTGAGCCCCCTTTGTTTAAACCTTGATAGCTGCACATTTTCCCCCTCAGTCAAAACTTTGCCTTTA AAAACAGTTCTGAACAATGTAACTTTTCCCCCTTTCTTCTCCTATTTGTAAACTGTTTCTGAACAATGTTATCAAACATATTTGTTTCATTTTCCTTTTC AAAAACAGTTCTAAAAAACAATGTTACAAAACAATTTTTTGAACAAAAAACTCAGAACACAATCAAACAGGGCCCGAGTTTCAAGTCTTTATGTTTCTAA TGACTTTTGTGTTTTATAAAATATCAGTCTGGCACTACCTATACTTCTTACATGTTTTGGGCAATACAATAACCAATCAAGTGTCATTAATTTAAGAAAA TAACTGTTGTCTGTATTGGTTATGTTTTTAAAATTGCTCATGTTAATTCATTCAATATTTTGCTTTCATCTAGGACTTGGTTCAAACTGACAGGGATGAT CCCAGCCTACCTCTGGTTACCGCTCCATTTGGGCATGCCTCCCAGG
• Tissue: pods
• Gene name: LI_gene_144480;
• Additional information: details;

Expression of Ll_transcript_391276

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0.1
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_391276

• Blastp: Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 from Homo with 26.3% of identity
• Blastx: Probable ubiquitin carboxyl-terminal hydrolase MINDY-4 from Homo with 28.78% of identity
• Eggnog: family with sequence similarity 188, member(ENOG410XSGV)
• Kegg: Link to kegg annotations (84182)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413527.1)
• Pfam: Ubiquitin interaction motif (PF02809.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;