Ll_transcript_391134

• Id Trinity: TRINITY_DN46424_c9_g2_i1
• Name Transcript: Ll_transcript_391134
• Sequence: ATTTTATGGACATCATGGAATATAAAGTCTTGAAATTAGTTTAATGCATCACATCAAAAACTTAACGTGCCATAGTATTCTTGAAAGATGATGAACTCTG CTAAGAAGTTGAGACTTTTGGAGCTCACAGTGCTGTTCTTCCTCTTTTTGAGTTGCTGTTCTACTTGTTCAGCTTGGTTTGGTAGTAGTAGTAATAATAA TAAACACAAAAGTAGTTCCAATACAAATCGAAGAAACTCCATTTCTCCACATGAACATGAAGCTACGTCATCATTGTCATCTTCTTCGTTTCTAAACCGT TTCCATGGTCACTCATCCATCATGTTATCCGTTCATGGCAATGTTTATCCAGTTGGGTTTTATAATGTTACTCTAAGCATAGGGCACCCACCAAGGCCAT ATTATCTTGATATAGACACAGGTAGTGACCTCACATGGCTTCAATGTGATGCCCCTTGTTCTCATTGTTCTCAGACACCCCATCCACTTTATAGGCCCAG CAATGACTTAGTGCCTTGCAGGCATCAACTTTGTGCATCTTTGCAGCAGACTGATAACTACCAATGTGAAAATCCAAATCAATGTGACTATGAAGTCGAG TATGTAGATCATTACTCATCCCTTGGTGTGCTTGTCAATGATTACTACCTTCTCAATTTTACTGATGGAAACCGACTTAAAGTTCGTATGACAATGGGAT GTGGATATGATCAGGTATTTCCAGATTCTTCATACCGACCCTTAGATGGAATGCTTGGCCTCGGGCGGGGAAAATCCAGCTTGATATCACAGCTGAGTGG TCAGGGTTTGGTGAGAAATGTAGTTGGACACTGTTTGAGTGTACATGGAGGAGGATATATCTTCTTTGGAAATCTTTATGATTATTCTCAACTGACTTGG ACTCCTATGTCATCCAGAGATAATAAACATTACTCAACAGCAGGGGCAGCTGAACTGGTCTTTGGAGGGAAGATAAGTGGTGTTGGAAGCCTTGTTGCTA TTTTTGACACTGGGAGTTCATACACTTACTTAAACTCTAAGGCTTACCAAGCACTAATTACCTGGTTGAAAAAAGAATTAGGTGGAAAGCCTATTAAAGA GGTATATGATGACCAAACTCTCCCTCTATGCTGGCATGGTAAAAGACCTCTCAAAAATATATATGAAGTAAGGAAATACTTTAAGCCCATAGCCCTTAGT TTCACTAGCAGTGGGAAATTTAAAGCTCAGTTTGAAATCCCTCCAGAAGCTTACCTCATAATATCAAACATGGGAAATGTTTGCTTGGGCATTCTTAATG GCTCTGAAGTAGGAATGGGAGATCTGAACCTTATTGGAGACATATCCATGTTAGACAAAGTGATGGTCTTTGACAATGAAAAGCAGCTAATTGGTTGGGC ACCAGCAGACTGTAATCTGGTTCCGAAATTCAGACATCTCAGCATTTGATCACATAAGAAACTTCATCCTCTGAATTTCTATCTTTGTTGTCATTACATT GTAACTATTGTCCTATTGTTTATAGATCAGGGTGATTGTTACTAAGCAAGTGCAAATAGCCTTATCTAGTACATCATATATATTGCTTTAGATACATACC TTGATTATTAGTACTGTTTTATGGTGTATTTCTGACACTTCATAGCTCCTACAGTACTTAGTCATATAATCATATTTTGTATCTGAATGTTATATACTCG GAACAAATCATTTTAAAAATCTTTTCAATCATAAAAAATGAC
• Tissue: pods
• Gene name: LI_gene_144504;
• Additional information: details;

Expression of Ll_transcript_391134

FPKM

• PAB: 6.4
• PNAB: 3.9
• PS1: 2.3
• PS2: 2
• PS3: 3.2
• PW1: 5.5
• PW2: 6.7
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_391134

• Blastp: Aspartic proteinase Asp1 from Oryza sativa with 43.75% of identity
• Blastx: Aspartic proteinase Asp1 from Oryza sativa with 43.75% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (4349962)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417617.1)
• Pfam: Xylanase inhibitor N-terminal (PF14543.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;