Id Trinity | TRINITY_DN46425_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_389862 |
Sequence | CATCAACATAACATAACGCATCAACTCTTCTCTCTTCTTTATCCTCTCACAATTCCCTTCTCTAACTTTCTAGTAGTTATAGGTTAGGTTGTGAACTGTT GCTCGCTTTCACCATGGAAAATAGAGAGTTAGCGGAGACAAAGGAAACAATATCTCAGGCTGTTGAGAAGGTGGAACTAGATGCTCTAGATATCCAAGGT AAATATCAGGATAAGCAATCGAATGAGACAAAAACTTCGGATATTAGTCATAATGGCCATGGATTTGACACTGAACAAGGTGATAAGTCAAACAAGATAA ATATAGTTGGAGAAATCGAAACTGAAGGCAATACTGTTGCACAAGAGTATTCCAGTGATAAGGTGGATGCCAGTGGAGATTTTGCGCCTAAAAGTCAAGA GGTAAACACAAATGATGTTGTGCAGAATGACTTGGCTAAAGAGGAGGATGATAGTAGAGACAAGGAACCAAAGCACATGGATCAAATTGCAGATGAAATT CCAAGTGAGGACCCCAATTTGGAGCCTGTATTTGATGGAACAGAGGTTCCCGGGATGGAAGCTTGCCGGAGCTCATCTACCCGTAAGTTGGACTCTGACC AGGAGACTCTAGTTGTGGTTGAGAAGGCAGTGGCTCTTAAAAATTTTGTCAAGGAGAAAAGCGCAGTAGCAGTCTCCACTATGCTGCGCCGTCTTTCTGG GAAAAGCGATGAAGGTGCTGCGGGTAATTTTGATGATGAAGGTAAAGATGTTTCAGGCTTCTCAAATAACAGTGAGCCCAATGCTGTTTCTGAGAAGTCA GTAGAGAAATTTGACTGGAATCCCTTAAATTATCTTAAGAAGTCATCTGATGCTGATTTGGAAAACAAAACTGAGCGGAGGGATTCCCTAACCAGAGGTC CACCAACACCAATAGCCATGAAAGGAAGGATAATACTATACACAAGATTGGGGTGCGAAGAATCTAAACAGGTTAGGCATTTTTTACATATGAAAAGGCT TAGGTATGTTGAAATCAACTTAGATGTGTACCCGAGCAGAAAGATGGAGCTGGAGAAGATTTCTGGGTCTACTTCTGTTCCCAAGGTTTATTTCAATGAA ATACTTATTGGAGGACTGAGTGAGGTAAAGACCTTAAATGTGTCTGGCAAGCTTGATGAGAAGATAGACTTTCTTATTACTGAAGCACCAATATTTGAAG CCCCATCACCTCCTCTACCTGGAGAGGATGATGAGTCCAGTAGTGGAGCACTTGATGAATTGGCTCTAGTTGTCCGCAAAATGAAAGAAACTATTGCTGT GAAGGACCGATTTTACAAAATGCGCAGGTTCACTAACTGTTTTCTTGCCTCAGAAGCTGTGGACTTCTTATCAGAAGATCAATATTTGGAAAGGCAAGAG GTAAGATTGATCTTATTTCTCAAGCATAGGTCTAATGCCCACAACCATTAAAGAGCCATGTACAAATCATCATATTTAATCATTTATTGTACAGAATTTG GTGTTGCTGCTACATTTTCAATCAAATGGTTAAACAAATCATCCACTAAATGTACAATTGATTCATTGGTTCATTAATACAATTTCTAGCTTCATAATGG CATTGGTGTCATTGTAAATCTGTTCTGTTGTTATAGGCTGTTGAGTTTGCACAAAAGCTTGCTAGCAAATTCTTCTTTCATCATGCTCTTGAGTGAGTCC AAGTACTCTGTTTAGTGTTTCCACTTTCCATTGTTTTAATTATGTTTTGTTACAGATTTGAGATTTGACAAATATCTCGATTTTCAATGATTTTTGTTTT GTTTTGTTTTAGTGAGAACATATTTGAGGATGGCAATCATTTATATCGGTTTTTGGATGATGATCCAATTGTGGCATCACAATGTCATAACATTCGAAGG GGAATACTTACTGTGAAGCCTAAACCTATAGTAGAAATTGCGTCAAGGCTGAGATTTCTGTCGTATGCAATGTTTGAAGCCTATGTTTCTGAAGATGGAC GTCATGTTGATTATACGAGTGTGCATGGAAGTGAGGAATTCGCAAGGTATCTGAGAATAGTCGAGGAGCTCCAAAGAGTCGAAATATGGGACTTGTCTAG AGAAGAGAAGCTCGCTTTCTTTATTAATCTTTATAATATGATGGCTATCCATGCAATATTGGTATTGGGACATCCAGCTGGAGCACTCGAAAGAAGAAAA TTATTTGGAGAGTTCAGATATGTTATTGGTGGGTCCACCTACTCACTTTCAGCTATTCATAATGGCATTTTGAGGGGAAACCAGCGACCACCTTATAACC TTAAGAAGCCATTTGGTGCAAAAGATAAGCGGACAAGGGTGGCGCTCCCTTACCCTGAGCCTCTTATTCATTTTACTTTGGTATGTGGTACCCGGTCTGG GCCTGCACTTCGGTGCTATTCTCCTAAAAATATTGATGAAGAATTAATGGATGCAGCCCGTAATTTCTTGAGGAGTGGGGGTGTTGTAATTGATTTGACT GCAAAGACTGCACAAGCTAGTATGATCCTTAAATGGTATAGTATAGATTTTGGCAAGAACGAGGTAGAGGTACTCAAGCATGTATCAAACTACTTAGACC CAGCTGACTCGGAAAAATTACTGGACTTGCTCGCTACTTCGGATTTGAAGGTGACGTATCAGGCTTATGACTGGGGTTTGAACGGCTAGCATGTGCTATC AAAGGTTCTAAGTTTTGAAAATACCACAATAGATTCATACTGATTTTCTATTAAAAGTTGTCATTCAAGTGTCAACGTTATATGTTATTTCACACATCTC TATTGGAAGGCACATTAGGCAGACAATTCGGTTGAGGAAATAATATGCTTATTTCCTGTTCTGCATTTACTACCTACAATTACATGTTCGTATGTTTTAT TTGTACAAGAATACTTCAAATGTACTCAACTAGAAAAGCTTGAACTTGTGATGCAGCTGCATCACTGTCTCTGGGGCTATTTGGCTAGTGAGTAATAATA CCTACCATTGCGCACTCTTTTGGTTGCACAAATCACAACCTCATTCCATTTCTGAATTTTAAGTGGTCACTATTAAACTTCATGTTTAATTGAGATGGAT TTACTTGTACCTTTAGGTACATTATGAATACATTATGTCATAATTTATAAATTATGTATCAAGTCTTGTAAGAAATGTATTTTGTTACACAATTTTTGTT ACTACCTGCTTTAAGCATTATACTGTGGC BLAST |
Tissue | pods |
Gene name | LI_gene_144505; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_389862
Blastp | Glutaredoxin from Pseudomonas with 31.58% of identity |
---|---|
Blastx | Glutaredoxin from Pseudomonas with 31.58% of identity |
Eggnog | Glutaredoxin(COG0695) |
Kegg | Link to kegg annotations (PA5129) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417193.1) |
Pfam | Glutaredoxin (PF00462.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |