Ll_transcript_390813

• Id Trinity: TRINITY_DN46446_c5_g4_i1
• Name Transcript: Ll_transcript_390813
• Sequence: CCTTTACGAACGTGATAGAAAAGAGGGTAATATAGTTTTGAAGGTAGAGAAACTGAATCCATAACCATGGAGGTAAAACAACAGAAAACGCAGAGCTGGA ATGGGGCAAACAAGTTGAATCCTTCCATAAAATACATCTCTCTTGTATTACTCCATCCAAATACTGAAATAAAGTATTGATAATTTTGGGTTATTATTTG CCTTTGTATTCAGGAGTTGGAATAAGTGGAAACTTTAGAAACAACATTGGGAGATCCAGCAACAAAGGAAAGAGGTCGTGGTAATTTTGATTATCAGATG GATGACAAGAATGAAAATGTCACGATTATGTGTTATATGCCTAATGAGGAGAAAGCGCTCTGTTTTCATTCCCTGCAGTCATGTTGTGTTGCCACAGGTG TGCCACATCGGTAGAACCATTGCTACCTGATACGTGATTCTCTTTGGTACGGGTGTGGGTACGTAATACGTGGTACGTACACTATGGTATATTTAGTAGG GTTTCTGTAGCTCTCTTTATAGTCGTTTCTAGCGCTGCTTCTTGTAGTTTTGAATCAACATTTGTTTTACCGTATGAGAAA
• Tissue: pods
• Gene name: LI_gene_144696;
• Additional information: -

Expression of Ll_transcript_390813

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.4
• PS2: 0.3
• PS3: 0.3
• PW1: 1.2
• PW2: 1
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390813

• Blastp: -
• Blastx: E3 ubiquitin-protein ligase SPL2 from Arabidopsis with 38.81% of identity
• Eggnog: Mitochondrial E3 ubiquitin protein ligase 1(ENOG410YF4M)
• Kegg: Link to kegg annotations (AT1G54150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020232197.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;