Id Trinity | TRINITY_DN46450_c0_g1_i4 |
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Name Transcript | Ll_transcript_390043 |
Sequence | CATCGGTGCATTTCAAAAAAGGAAGATATAGACTTGTGTGAAAAGTCGAGCTATTTGACACTATAGACTTGCTTAATAACTAGTTAATCAAGCCATAAAT AAGTGTGGAAACAGAATTTTGTGGTGTGGACGGATCCCCCATCTATGACCACATGGATAATCATGTCGAAAGTGATTTTGGCAAAAATCTTTGACATTCC CATTTCTTAACACAATCTTGGTATTCAAATGCTCATAAGATTATCGTTAGTTGGTTGGTTTAAGTAATACATCATTAATCCCTTGTAACTCGTAAGTAAG GTTGTCTCTTTTTAAGAGTTACTCCCCTAGGATATGAATTTGCGTCCCTATTCTTGGCGTTCGGAATTGCTTGTCACCTCAACCTACCCTGCATACATTC TCATTTCTAAAAGCTGATAGATTCCTGTAATCTTATCTTCCTTTTCTTGAGGAATATATACCTTGACCACTTCCATCAGTCAGAAAAGACAAATGCAGTC TTGATTCTGTTCCATCTCTCTTCTCCAAAGCCACTTGTTTGCTCCATTATATATGGCTGCAACCTGAATTCTTTCTTATAGCATTCTTGTGGTGTTCTTA ATTATTTTTCCTTCTATCTTTTTTCATCCATAGTTCCTCTTCTAGGATCCTAGAATAGCGTTAATGGCGTCCAAGAGAATACTGAAGGAGCTCAAGGACT TGCAGAGGGATCCACCAACTTCATGCAGTGCAGGCCCTGTGAGTGAGGATATGTTCCATTGGCAAGCAACAATCATTGGTCCAAATGACAGTCCCTATGC TGGAGGTGTTTTCCTTGTTACTATCCATTTCCCTCCTGATTATCCCTTCAAACCTCCCAAGGTTGCATTCAGGACCAAGGTATTCCATCCAAACATAAAT AGTAATGGTAATATTTGTCTTGACATACTCAAAGAACAATGGAGTCCTGCTCTCACCATATCCAAGGTGCTGCTCTCTATTTGTTCACTGCTGACTGATC CAAATCCTGATGACCCTCTTGTGCCTGAAGTTGCTCATATGTGTAAGACAGATAAATTCAAGTATGAATCCACTGCTAGAAGCTGGACCCAGAAGTATGC CATGGGATAACAATCTTGGCCTCTTGCTTCCTCCAATACTTTTGGAGCTTTCTTTTTTGTTCTTCAAATCTTCCCTCTTGAAGTATGCCATGAAATAAGA ATCTTGGCATACATATGAGAAAATTGTTCTCAAATGTTTACCTTTGTACTTGGACAATGCTACCTTAAGAATAAATGAATATTACTCTATTTTATAGCTT TCTGTATTCAGCACATGAACTAAGTACCAACAAGGCTCAATCATTGTGTACTTTCTTAGTTCAAAAAACAAGGTCTTTATGAATCATTACCTCAAAACTC TCCAATATTTTTAATTTGTTTTCACAAATCCCACTTTCTTTGTCATACCAAGATTTATAATTAAGCATCTTTTCTGTACAGACCCCCATGTATGCTTCAA TCAATATCCAATAAGCAGAATATCAT BLAST |
Tissue | pods |
Gene name | LI_gene_144712; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390043
Blastp | Ubiquitin-conjugating enzyme E2 10 from Arabidopsis with 93.92% of identity |
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Blastx | Ubiquitin-conjugating enzyme E2 10 from Arabidopsis with 93.92% of identity |
Eggnog | ubiquitin-conjugating enzyme(COG5078) |
Kegg | Link to kegg annotations (AT5G53300) |
CantataDB | Link to cantataDB annotations (CNT0002933) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412896.1) |
Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |