| Id Trinity | TRINITY_DN46453_c5_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_390860 |
| Sequence | CTCTTTGATAAATATAGATGATATCTAAAGTATATCAGAGGAAGATGATACATGTGCTAGCGATGGCCATATAGAGCCCACTAAAGAAAACACAGGTAAT AATCCAAAGCTCATATTTTTTAAATAGTAAATAGATTTCTATAACAGTTATTCTGATTGTTAAATTGATAGGATATTTTGATATTGGTGACTCGATATAT GAATGTTCTTACTGTGGAGCATATATGTGGTACCAAGAAAGGACGAAGAAACCCAAAACTCCAAAAAACCCCAAATTCCAACTATGTTGTGGTGTTGGAA AAATTCAACTTCCATTATTGATGCCTCCTCCTCCTACATTACAACATTTGTTATTTGATAACAATTCAAATGATAGTAAGAACTATCAACAATATATTAG AGCATATAATATGATATTTGCCTTTACATTGCCCGGAGCAAAAATAGATAAGTCTTTCAATGATGGAAGACGCCCACCTTCATTTAGAATACAAGGTCAG ACATGTCATCTAATTGGTAGTTTGATGCCAATACCCGGAAATAGTCCAAAGTTTGCACAACTCTACATATATGACACTGAAAATGAAATACAAAATAGGC TTGCAGAGTTAAGGTACATTTAATTATTGTACTTATTAAGGCAACATAATATACATTTGAATTTTCATGTAATTCAAACTTTTCTGTTTTATAGGAATGA AGGTCAATTGGATCCAAAAATTGTTTCTAAATTGTCTAGGATGTTGGATGAGCATAACATACATGTTAAATCATCCAGGATGACTAAAGAGCATTTTGAA CATTCAATGATTAGTGACATGAAGCTCAACTTGATTTCTGATAGAGTTTCTGATGGTAGAGTTTATAATCTCCCAGCTATTTCTGAAGTAGCTGCTCTTA TCGTTGGTGATGTTGATAATCCTTCAAGCAGAGATATAGTTTTGGAAAAACAAAGTGGCAAACTTCAAAGGATAAACGAGTTGCATACAAGTTATCTTGG TTATCAATATCCTCTTTTATTTCCATATGGTGAGGATGGATATAGGCATGATGTATGCTACAGTTCTACATGTTCTAGGCAATACAAAAGAAATAGAGTT ACAATAAAAGATTGGATGTGTTTTCGATTGCAAAGTAGAAAAAATGAGGCAGAAACACTTTTAAGGTCAAGGAGGTTGTTTCAACAATTTGTCGTTGATG GTTATTGATGGAGGCAGACAAACTTAATTGGGTGAGAAACAACCAGACACAACTCAGAGTTGAGAAGTATAGTAATTTGAATTCCAACTCGGACTCACTT GACACCCAAGGAGCTAACAAAGGCAAAATGATCATATTGCCTTCATCATTTGTTGGTGGTAGAAGATATATGGATCAATTATACTTTGATGATATGTACA CAATAGAGTTTCAAAAAAGGGGATTGCCTCATGCTCATATTCTATTATTCCTACATCCATCTTCGAAGTACCCAACCGCAGAAAACATAGACAAGATAAT TACAGCTGAAATACCAAATCCTGTTGAAGATCCATAACTATATGATTTGGTTAAGTCTCATGGTTCATGGTCCTTGTGGAAGTGCAAACACTAAATCGCC TTGTATGAAGGATGGAAAGTGTACAACGTACTATCCCAAAAAAATTTCCAACGCAATACAATTGTTGATAATGAAGGGTATCCTATTTATAGGAGAAGAT ATAACGGGCAAACCATTGACAAAAATGGTGTTACTCTCGACAATTGTCATATTGTCCCTTATAATCGAAAACTGCTTCTAAAATATCAAGCGCATATCAA TATGGAATGGTGTAATCAAAGCAGCTCAATCAAATACCTATTCAAGTACATTAACAAAGGCAGTGATCGGGTAACTGTTGCTATTGTTCCAACAGATAAT GAGGGTGGATCTCAAGTACAAAATATAGATGAAATCAAACAATATATTGACTGCAGATATATGTCACCATGCGAGGTATGTTGGAGAATTTTTCATTCCC GATTCATGGTAGATCACCTGCTGTTGAAAGATTATATTTCCATCTTGAAAATGAGCAGTATGTTATATTTGATGATAGTGAAGATATTGATGATGTGCTT TCTAAGCCTACAATTAAGCAATCAATGTTCACATCTTGGATGGAAGCAAACAAAAATTATCTCGGTGCAAGAAATTTGACATATGCTCAATTTATTTCAA ACTTTGTATACATGAGTCGTAGTAGATGTTGGAAACCAAGGAAACAAGCATACGCAATTGGTAGACTAATTTGGGTTCCTCCAAGCACTGGAGAGTTGTT TTACTTACGGATGATGTTAACTGCAATTGAGGGACCATATAATTATGAAGACATAAGGACAATCAACAACGTGATATATCACACTTTTAGGGAAGCATGC TTCACTATGGGTTTCCTCGAAGATAATAAAGAATATATTGAAGCTAACAAAGAAGCTAATAAATGGGGGTCAGGTCACTACCTAAGAAAATTATTTGTGA CAATGCTCACCTCAAATAGCATCAATCGTCCAAAACATGTATGGCATCAAACATGGCAATTCCTAGTCGATGATATTCTTTATGAACAAAGAAGGTTATC AAATAGGCAAGATTTGCAGCTAACTGGCCGACAATTGCAAAATCTAACTTCGTTAGACATTGAGAATCTATTACAACAAAATAGAAAAAGTCTCAGGGAC TATCCATCAATGCCGTATCCAGATGGGCGAATCACAAGTCAATTAGGGAATAGACTTATATATGACGAGCTTGATTATGATAAAAGGAAATTGAGAGATG AATTTATACAATATTTTAACTCACTTACAAATATGTTTAGTTGTCTTTATTAATAACTAACATTACATTAAATAATATCATGTTTTGTTATTAACAATTA CTGATTTGGCATTTTAGATGAACAAATGGCCATTTTTAATAAAGTCATGAGAGTTGTAAATGATGAAAACGGGGGAACCTTCTTCCTATACGATTATGGT GGCACTGGTAAAACTTATATGTGGAAAACATTAGCTTCAGCACTACGTTCAGAAAATCATATAGTTGTAACTGTAGCATCAAATAGAATAGCAGCATTGT TATTGCCAGGGGGACAGACAACACACTCTAAGCTTGCCATACCTGTTCCTACCCTCGAAAACTCAACCTACAACATTCATCAATGGAGTGAACCTGCAGA ATTGTTAAAGTTGATAATATGGGATGAAGCTCTAATGACGCACATATATTGTTTTGAGGCATTAGATAAAACCCTCAAAGATATAATGAGTTTCAAAGAC GATGAAAAATCAAACTTTGGTGGAAAAGTAATTATTTTTTGTGGTGACTTTAGGCAAATTCTCCCTGTCATTCCAAGAGGAAGTCGTTCGGATATCATCA ATGCTACAATAAATGCCTCATATCTTTGGGACAACTTTGAGGTATTAACTTTAACAAAAAATATTTGTTTACAAAATAACATTACCAACACAAACCAGTC ACAAGTTGAATAATTTGCAAAATGGATTTTAGATTTAGGTGATGGAAAATTAGCAGAGCCAAATGATGATTATGCAACGATTGAAATACTCGAATAATTT CTGACTACTAATTATGATAATCCCATTCATGATATAGTTAATACTACATATCCAAATTTGGTACATCAATACTCGAATGAAGAATTTCTTCAATCTAGAG CAATTTCGGCATCCACAATTGAAACAGTTGATGAAATAAATGATTATATTCTATCATTGGTTCCAGGTGATGAAAGAGAGTATCTAAGCTCAGATTCTAT TGATAGGTCAGAATCTAATGACCATGAAGCTCTCTACAAGGACGTACTCCCGAATTCCTAAACCAACTCAGAACTTCAGGGTTACCAAATCACAAAATCA AATTGAAGGTTGGATACATGATTATACAATCAAACAACACATGTTTTTTATTAACTTTTGGTCTATATTTAGTGTAAATGATCTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144731; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390860
| Blastp | - |
|---|---|
| Blastx | ATP-dependent DNA helicase PIF4 from Trypanosoma with 32.37% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015954623.1) |
| Pfam | - |
| Rfam | - |
| GO | - |