| Id Trinity | TRINITY_DN46453_c5_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_390877 |
| Sequence | TGTAGTTTGTGCCCGAATGAACCAAATCGGAGGTGACGATGAGATAAGACTATGAAGGTCGTGAACGACGATCATGCCATTGTTGAAGAGGTCTGGTTGT ATGATCTCCGCACCTCCGATGCAAACTTCTGCAGTGGCGGCTGAGCCTTATTACCACGGTGGCACTCGGCGGTGAACGGGGATTCTGGTCGTGAATGATC CAAGGCCATGACTTGGCTGCTCCGTGCAGCATATTGATGCCGAAGGAACCCAAAAGGATCAGCGATGGATATGAATGAGGACACAAGAAATCTAAAAACT CAGGCACGTTTGAAGAGAAAAATGATATTCCAAAAAAAACGGAATGGAAAGCAGTTTGAAAATTCAGGTACAGTGTTGATTAATGATAAGAACTTTTTTT GCTATAGTTCATCCTCTATCAGCAAAAGAAAAGGAAATGCTACTCATTTGGCCAATATTACTCCCACCACTGTCAATGAAGCCAATGGCATGATCGCGAC TGAATATGATATCTAAAGTATATCAGAGGAAGATGATACATGTGCTAGCGATGGCCATATAGAGCCCACTAAAGAAAACACAGGAATGAAGGTCAATTGG ATCCAAAAATTGTTTCTAAATTGTCTAGGATGTTGGATGAGCATAACATACATGTTAAATCATCCAGGATGACTAAAGAGCATTTTGAACATTCAATGAT TAGTGACATGAAGCTCAACTTGATTTCTGATAGAGTTTCTGATGGTAGAGTTTATAATCTCCCAGCTATTTCTGAAGTAGCTGCTCTTATCGTTGGTGAT GTTGATAATCCTTCAAGCAGAGATATAGTTTTGGAAAAACAAAGTGGCAAACTTCAAAGGATAAACGAGTTGCATACAAGTTATCTTGGTTATCAATATC CTCTTTTATTTCCATATGGTGAGGATGGATATAGGCATGATGTATGCTACAGTTCTACATGTTCTAGGCAATACAAAAGAAATAGAGTTACAATAAAAGA TTGGATGTGTTTTCGATTGCAAAGTAGAAAAAATGAGGCAGAAACACTTTTAAGGTCAAGGAGGTTGTTTCAACAATTTGTCGTTGATGGTTATTGATGG AGGCAGACAAACTTAATTGGGTGAGAAACAACCAGACACAACTCAGAGTTGAGAAGTATAGTAATTTGAATTCCAACTCGGACTCACTTGACACCCAAGG AGCTAACAAAGGCAAAATGATCATATTGCCTTCATCATTTGTTGGTGGTAGAAGATATATGGATCAATTATACTTTGATGATATGTACACAATAGAGTTT CAAAAAAGGGGATTGCCTCATGCTCATATTCTATTATTCCTACATCCATCTTCGAAGTACCCAACCGCAGAAAACATAGACAAGATAATTACAGCTGAAA TACCAAATCCTGTTGAAGATCCATAACTATATGATTTGGTTAAGTCTCATGGTTCATGGTCCTTGTGGAAGTGCAAACACTAAATCGCCTTGTATGAAGG ATGGAAAGTGTACAACGTACTATCCCAAAAAAATTTCCAACGCAATACAATTGTTGATAATGAAGGGTATCCTATTTATAGGAGAAGATATAACGGGCAA ACCATTGACAAAAATGGTGTTACTCTCGACAATTGTCATATTGTCCCTTATAATCGAAAACTGCTTCTAAAATATCAAGCGCATATCAATATGGAATGGT GTAATCAAAGCAGCTCAATCAAATACCTATTCAAGTACATTAACAAAGGCAGTGATCGGGTAACTGTTGCTATTGTTCCAACAGATAATGAGGGTGGATC TCAAGTACAAAATATAGATGAAATCAAACAATATATTGACTGCAGATATATGTCACCATGCGAGGTATGTTGGAGAATTTTTCATTCCCGATTCATGGTA GATCACCTGCTGTTGAAAGATTATATTTCCATCTTGAAAATGAGCAGTATGTTATATTTGATGATAGTGAAGATATTGATGATGTGCTTTCTAAGCCTAC AATTAAGCAATCAATGTTCACATCTTGGATGGAAGCAAACAAAAATTATCTCGGTGCAAGAAATTTGACATATGCTCAATTTATTTCAAACTTTGTATAC ATGAGTCGTAGTAGATGTTGGAAACCAAGGAAACAAGCATACGCAATTGGTAGACTAATTTGGGTTCCTCCAAGCACTGGAGAGTTGTTTTACTTACGGA TGATGTTAACTGCAATTGAGGGACCATATAATTATGAAGACATAAGGACAATCAACAACGTGATATATCACACTTTTAGGGAAGCATGCTTCACTATGGG TTTCCTCGAAGATAATAAAGAATATATTGAAGCTAACAAAGAAGCTAATAAATGGGGGTCAGGTCACTACCTAAGAAAATTATTTGTGACAATGCTCACC TCAAATAGCATCAATCGTCCAAAACATGTATGGCATCAAACATGGCAATTCCTAGTCGATGATATTCTTTATGAACAAAGAAGGTTATCAAATAGGCAAG ATTTGCAGCTAACTGGCCGACAATTGCAAAATCTAACTTCGTTAGACATTGAGAATCTATTACAACAAAATAGAAAAAGTCTCAGGGACTATCCATCAAT GCCGTATCCAGATGGGCGAATCACAAGTCAATTAGGGAATAGACTTATATATGACGAGCTTGATTATGATAAAAGGAAATTGAGAGATGAATTTATACAA TATTTTAACTCACTTACAAATATGTTTAGTTGTCTTTATTAATAACTAACATTACATTAAATAATATCATGTTTTGTTATTAACAATTACTGATTTGGCA TTTTAGATGAACAAATGGCCATTTTTAATAAAGTCATGAGAGTTGTAAATGATGAAAACGGGGGAACCTTCTTCCTATACGATTATGGTGGCACTGGTAA AACTTATATGTGGAAAACATTAGCTTCAGCACTACGTTCAGAAAATCATATAGTTGTAACTGTAGCATCAAATAGAATAGCAGCATTGTTATTGCCAGGG GGACAGACAACACACTCTAAGCTTGCCATACCTGTTCCTACCCTCGAAAACTCAACCTACAACATTCATCAATGGAGTGAACCTGCAGAATTGTTAAAGT TGATAATATGGGATGAAGCTCTAATGACGCACATATATTGTTTTGAGGCATTAGATAAAACCCTCAAAGATATAATGAGTTTCAAAGACGATGAAAAATC AAACTTTGGTGGAAAAGTAATTATTTTTTGTGGTGACTTTAGGCAAATTCTCCCTGTCATTCCAAGAGGAAGTCGTTCGGATATCATCAATGCTACAATA AATGCCTCATATCTTTGGGACAACTTTGAGGTATTAACTTTAACAAAAAATATTTGTTTACAAAATAACATTACCAACACAAACCAGTCACAAGTTGAAT AATTTGCAAAATGGATTTTAGATTTAGGTGATGGAAAATTAGCAGAGCCAAATGATGATTATGCAACGATTGAAATACTCGAATAATTTCTGACTACTAA TTATGATAATCCCATTCATGATATAGTTAATACTACATATCCAAATTTGGTACATCAATACTCGAATGAAGAATTTCTTCAATCTAGAGCAATTTCGGCA TCCACAATTGAAACAGTTGATGAAATAAATGATTATATTCTATCATTGGTTCCAGGTGATGAAAGAGAGTATCTAAGCTCAGATTCTATTGATAGGTCAG AATCTAATGACCATGAAGCTCTCTACAAGGACGTACTCCCGAATTCCTAAACCAACTCAGAACTTCAGGGTTACCAAATCACAAAATCAAATTGAAGGTT GGATACATGATTATACAATCAAACAACACATGTTTTTTATTAACTTTTGGTCTATATTTAGTGTAAATGATCTCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144731; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390877
| Blastp | - |
|---|---|
| Blastx | ATP-dependent DNA helicase PIF4 from Trypanosoma with 32.37% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_015954623.1) |
| Pfam | - |
| Rfam | - |
| GO | - |