Ll_transcript_389935

• Id Trinity: TRINITY_DN46457_c2_g4_i1
• Name Transcript: Ll_transcript_389935
• Sequence: CGGAATTCGCAAGAGATCTTTTGCCCAAACACTTCAAGCACAACAATTTCTCAAGCTTCGTTAGACAGTTAAACACCTATTAACTAGATGGAGCAGAAGA GGGGAAATTGACAAAGAGAGAAGTTTTCAGGGTTTTAGGAAGGTCGATCCAGATCGTTGGGAATTTGCAAATGAGGGCTTTTTGAGGGGTCAAAAACACT TGCTTAGGAGTATAACTAGGAGAAAACCTGCCCATGGTCATAACCAACAACAGGCTCAGCAATCACATGCACAGAGTTCATCACCAGTAGGGGCATGCGT AGAAGTTGGTAAGTTTGGGCTAGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAATGTGCTCATGCAAGAACTTGTGAGGTTGAGGCAACAGCAACAG ACCACTGATAACCAGCTGCAGTCTATGGTTCAGCGCCTTCAGGGGATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAAGCTGTCCAGAGCC CTGGTTTCTTTGCTCAATTTGTACAACAGAAAAATGACAGCAACAGGCACATAACTGAAGTCAACAAAAAGCGTCGGCTCAAGCAGGAAGGTATTTCTGA AACAGAGCATGCTGCTGCTCCCGATGGACAAATTGTTAAATATCAACCTGTGATGAATGAGGCAGCAAAAGCAATGCTAAGGCAGATCATGGCGTGGGAT GCTTCTCGTGTAAAATCGTTTAGTAAAAGCCCTGTTAGTTACTTAATTGGTGATGATTCACCGCCACCCAGTACATTGGATAGTAGCAGCTCCTCAAGCC GGGCTTCTGGAGTAACACTTCAAGAGGTCTCTCCAGCTTCTATGCAGTCTTCTCACATTCCTACTGCAAAGGGGATACAAGGGCACATCCCACCTGAAAA TCTATCTTCAACGCAAACTGCAGCTTCTGAAAAAGTTACGAAGGTTGGAGTGCCGGAGGCACCTTCTATCTGTGTCCCTCAAGCAGATATGATCATGCCT GATCTTTCTCCCATAACAGGAAATATTCTTGATATTCCTGACGAAAATTTAATGTGCCCTGAGACAGGCAGCGACACATTTATGGATCCTACTTCATTGG GGGCCAGCGAGTCATTTCCCTTAGACTTCGACGGTATTCCACCTGATGCAGACATTGAAGATTTCTTAGGCAATCCTTCTATTTGGGATGATTTTTTGCA AACTCCAGTGTCAGAGGATATTGAGACTGATGTTGCTGAAGTGTCAGAAGGGAATGAGGTGCAGCCAACAGGAAATGGATGGAACAAAACTGAACATTTG GATCAACTTACAGAGCAGATGGGAACTTCTTTCATTTGATGCAAAAAGAGGTTGATTGTGTATGAAATTTAGATTAGTCTTTCACAATGTCTAAGGTAAT CCCTGACCCAAACAATACTCAAATGATGTTTGCTGAAGGCCTCTGAAAAATATACATCAATTTTTCTTTGGAAGATTTACTTCATGAGCATTATTAAAGG GCAGAAACGATGAATGATATTGGTTACCATGTCAAGCTGCTTTTCCTTCTCAATTTCCTTTACACTTTCTTAATGTCTTCTTTGTGAAAGTGAAAATTGA AGAACTGAAGGAGAATTGAAAATTAGCAATGTATTGAGGTACATTAAATCCATCGATTCATTGCAGACTCTTCTCTTCTAAATTTAATTTATGACATAAG TTTAATCCAATAATAATATGTAGTCATGCGTTGAAGAGAGTAGACTTTAGAAATCTTCTATGAGCACGTGGAAAATTTCTT
• Tissue: pods
• Gene name: LI_gene_144777;
• Additional information: details;

Expression of Ll_transcript_389935

FPKM

• PAB: 1.8
• PNAB: 1.5
• PS1: 1.3
• PS2: 0
• PS3: 0.7
• PW1: 1.1
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_389935

• Blastp: Heat shock factor protein HSF8 from Lycopersicon with 45.96% of identity
• Blastx: Heat shock factor protein HSF8 from Lycopersicon with 48.11% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424141.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;