| Id Trinity | TRINITY_DN46459_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_390377 |
| Sequence | CCAACCGGCTCAACCAGTCATCCTTATCACTTCCCCTATTTTCTATTTCTCTCAAACCCCACCCCGTTCTTTCACAGAGTTAGAGGCCACAACCCTCTCC CTCTCTCACAATCTCAAATTCTGATTTTAATCACTTTTTTTAAATGGATCGGATTAAAGGACCATGGAGCCCCGAAGAGGACGAAGCGTTGCAAAAGCTC GTTGAGACCCACGGTCCAAGAAACTGGTCTTTGATAAGCAAATCAATTCCTGGTCGATCCGGCAAGTCGTGCCGTCTACGTTGGTGCAATCAGCTGTCTC CGGAAGTAGAGCACCGTCCATTCTCGCCGGAAGAGGATGACGCCATCATCAGGGCCCACTCTATGTTTGGTAACAAATGGGCAACAATAGCTCGCTTACT TAACGGCCGAACTGATAACGCCGTTAAGAATCACTGGAACTCAACCCTTAAAAGAAAATGCTCCGCCGTTACCGTCTCCGATTCCGATTCCCCCCCGCTT AAAAGATCCGCTAGCCTCGGAGCGGGTACAACAATTTCGGGTCTATTTTTGAATCCGGGAAGCCCATCCGGGTCCGGGTTGAGCGATCCAGGTTTACCAA CTATCCCAACTCCTCAAACAAAAAACGATGTGTCTTCAACTATGGATCCACCAACGTTGCTTACGTTGTCCCTTCCCGGGTCGGGCTCTAGCAAAAACGA ATCCGGATCCGGGTCGAAGCAGAGACGAAATTCTAGCCCTACCCATTTGATCCCACCGGTGCCGGAGAAGCAATTATTCAACGAGGAGTTTTTGGCAGTG ATGCAAGAGATGATAAGGGATGAAGTTAGGAGTTACATGTCTGGGATTGAAGTGCAGGGTGGGATGTGTGTACAACAAACCGAAGCAATTAGGAACGCTG TGGTGAAACGTATGGGAGTTAGTAACGTCAAGTAGAGAAGGATGGTGGTGAAGGAGAGGAATTTGAATCAGTTATTTTGTTTGGTTTCGTTGTTATTATC ATTAGTTTAATTAGTTTAAATTGTCCCGTAGTAAAGATGGTAATAATTTTCGTGATGTACAGAAGGAAATAGCAGACATATCACAACTGAACGAGAAGTA AATTGTGCATTTTGTTAAGTGAAGCTGTGAGGAACCATCTTTTGCATAACGTGAATGTGATAAGCTTTACGCTATTTTGTTGGAATTAAAATTTTAGGTA AAGGATTCACTTAAAAAACTTACTCTATGCATTAATTATTAATTGTAAGCGAGTTTAATGGCTGTGACGGAGAGTTACTTTTTTAATAAGTGAACTCCAT CTAAAAAGATTAACATGGAAGAAACAAGTTATTTTGTAATTATGGATGAAAATCAGATGATTTCTATGAATTGAGCCATGCCCAAGTTTAATGGTTAAGC GTGTTGGTGACGGGGCAGATAGAAGGACAGAAAGGACAACCGTTTTTGTCTGTTTTCATCAACTTGAAGGCAAATTCAAAGCCAGTTAATTTTTTTAAAA TTGACTAAAAACAAGTCTGTATATAGTATATATTCCTATATGTGTATTGATTGATTAGTTCCCTTAAATAATTTGAATATGGATACATTTTTATTTAGGA TTTAATATGTGTACAGTGTAAGTGTTTTTTACACTGTCAGCAAACCATCCACCGTTGATTTGTAAATTATCATTGATCGTCCAACAAAAATAATATAAAT CAATGGTGAATGATGAACTGACAGTGTAAAAAACTTTACACTGAGACATAGATTTTAAACTCATTTTTTTATGAGTTTAAATTTTGTACACTGACAGTAT AAAGTTTTTTACACTGTCAGCCTATCATTCACCGTTGATTTGTATTACTTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_144785; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_390377
| Blastp | Transcription factor MYB44 from Arabidopsis with 53.09% of identity |
|---|---|
| Blastx | Transcription factor MYB44 from Arabidopsis with 74.62% of identity |
| Eggnog | Myblike DNAbinding domain containing protein(COG5147) |
| Kegg | Link to kegg annotations (AT5G67300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438536.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |