Ll_transcript_390922

Id TrinityTRINITY_DN46463_c2_g1_i4
Name TranscriptLl_transcript_390922
SequenceTATGAGTTGCTGCAAATGGATGAGGATGAAGAGATTGGAGACTATCTCACAAGAATCAGAACTTTAACCAATTTGATGAAAGGTTGTGGCAAAAAGATTT CTGAAAAATCCATTGTTGAAAAGGTGCTGAGAACACTCTCTTCTAGATTTGATAACATAGTAGTAGCTATTGAAGAATCCAAGGACATTGAGGCACTCAA GGTGGAAGAGCTACAAAGCTCCTTGGAAGCACATGAACAAAGGTTCATAGAAAGGCAAGCCAATAGACAGAATCAGCAGGCCTTAAGTGCACAATTCAGA GTCAAGAAAGGCTCTAGCCAAGTGATCAAATCTAAGGAGAAGGGTAAGTGGAAGGTGGATGCAGAAAGTGTGAGGTCAAAGGGCTCAAAATTTCAGAAGA CTAGCACATGTAAAACTAGTCAAGAAAGTGAGGCTGCAAGAAGCAAGAAAAGCACAACTCAGTTGGTTGGAGGAAAGAAGAAAGATAAGAGCAAGATTCA ATGTTTCAATTGTAGAAATTGGGGACATTATGCTTCTGAGTGTAAGGCAAAAAAGAGTGTCAATGCCAAAGAAGAAGAAGCAAGGCTTGCAAAGGGTGAC ACAAGTGAATCAGAAGAAGATGTGTTACTATTAGCATTGAAGGAAAGCTCAGATGATGCACTCTTGATGGTGAGGGAACACTGTGATCAAGGAACCAACA CTTGGTACCTTGACACAGGGTGTTCCAACCATATGACAGGGAACAAGGACTGGTTTGAAAGCTTAGACAACTCAATTCACACCAAGATCAAGTTTGCTGA TGACAGTGTGATAAATGCAGAAGGAGTTGGTAGGGTACTCATAAAGAAAAGAGATGGCTCATCCTCATACATCAAGGATGTGTTATATGTGCCAAAGATG AAAAGCAATCTGTTGAGCTTAGGACAATTGCTTGAAAAGGGCTACATCATGAGGATGGAAGATAAGCTGTTGAAGGTGTTCAACAATAAGGGATCACTAA TCTTGAAGGCTCCACTGTCACAAAACAGAACCTTCAAGATTGGAATTCAAAAAGGAAATCATCAATGCTTGGAGTCTGTCATTGATGAGAATTGGCTATG GCACCAAAGACTAGGCCATCTTAACTTCAAAAGTTTGGAGCATCTGAGTAAAGATGGACTAGTGGATGGATTGCCAATGATAAGAACACCTACAAGTCTA TGTGAGGAGTGCATCACAAGCAAACAAACCAGAAATAGCTTCAGTACTAACATACCTACAAAATCCACCAAGCACCTGGAAATTGTGTATACTGATGTGT GTGGTCCTTTTGAGGTTGATTCACTTGGAGGTAGCAAGTATTTTCTGACTTTCAAGGATGACTTCACCAGGAAGCTATGGGTTTATCTGTTAAAGAAGAA GAGTGAAGTGTTTAGTAAGTTCAAGAGCTTCAAAGCATTGGTGGAAAATCAGTGTGGCAGAAAGTTGAGCTTGCTAAGAAGTGATGGTGGAGGAGAGTAC ACTTCTCATGAATTTCATGAATTCTGTGAAACAGAAGGAGTGACTCATGAGATAATTGCACCATATACTCCTCAACACAATGGAGCAGCTGAGAGGGTGA ATAGGACAATCTTGGATATGGCAAGAAGCATGCTAAAAACCAAGAGACTTCCTAAGAATCTTTGGGCAGAGGCAGTCTCAACAGCAGCCTATATTCTGAA CAGATGTCCAACAAAGAGATTGAAGGACAAGACACCAGAAGAAGCCTGGACAGGACTCAAACCAAGCATCAAACATCTGAGAGTTTTTGGTTCTGTATGT TACAAGCATACACCTGACTTCAAGAGACAAAAACTTGATGACAAGGGAGTGAAGCTAGTGCTGCTTGGTTATCATTCTTCAGGTGCTTACAAAGTGCTGG ACCCTGAGACAAAAGTCATATCATTCAGCAGGGACCTCAAGTTTGATGAGACTCAAGTTTGGGACTGGACAGCACAAGTAAGGGCAGCCTCAATCAGACA AGTTGTGATGCCTATTGTAGAGAGTCAAAATTCAGAAGATTCAAATGCAATCAGTGAATCCAATGCAAGGGTAACTGAGAGACCTCAAAGGCAAAGAAAC TTGCCCTTGAGACTCAGAGACTATGAGGTATTTGAAGATTCAGAAATTACTCAAGAAGGAGATCTTGTGCACATGGCATTGCTGGCTGAAGTTGAACCTA TATCATTTGATGAAGCAGTGAAAGATGTCTGCTGGATTGAGGCTATGAAAGAGGAAATCAGTTCAATTGAGAAGAATTGTACTTGGCAACTTACTACACT TCCAAAGGGTAAGAAAGCAATAGCTGTCAAGTGGGTTTATAAGGTGAAGTTGAGGCCAGATGGAACAATTTCAAAGTACAAGGCAAGATTGGTTGCAAAA GGGTTCTTGCAGAAACCAGGCTTGGACTTTGATGAAGTGTATGCACCTGTGGCCAGAATGGAAACAGTTAGGCTTGTGATAGCAATTGCAAGTGCAAAAG GGTGGCCTATTTGTCAAATGGATGTGAAATCAGCATTCTTGAATGGTCCATTAGACAAAGAAGTTTTTGTTAAACAACCACCTGGCTTTGAAGTTGCAGA TCAGACTCAAAAGGTGTATAAGTTGCAGAAGGCACTCTATGGCTTGAAACAAGCACCCAGGGCCTGGAACAGAAGGATAGATAGCTTCCTTACTCAACTA GGCTTCTCAAAATGTATCATTGAGCATGGAATCTATACTAAAGACATAGGTTCAGAAACACAAATCATCATATGCTTATATGTTGATGATTTGTTAATAA CAGGCAGTATGGAGAGTGAGATTGAATGGCTCAAATCAAAACTAAATCTTGAATTTGAGATGTCTGACCTAGGAGCATTGGCATACTTCTTAGGGATTGA ATTTGCTAGAACAGAAGCAGGGATTTTGATGCATCAAAGGAAGTACATATCTGATGTACTTGGCAGGTTTGAAATGCTTGAATGCAATCCAGCCTCAACA CCAGTTGAGGTTGGACACAATCTAAGCATAAATAATTCAGATGAGCAGTTGATTGAATCAACTCCCTATAGGCAAGTAATTGGATCTCTAAGATACATAT GCAACTCTAGACCAGATCTTGCTTTTGGAGTAGGCTTAGTGAGCAGATTCATGGAGAAACCAGCTCACTCTCACATGCAAGCAGTGAAAAGAATACTCAG ATACTTGAAGAGCAGCCTAGACTATGGTGTTCTGTTCCCTGCAAACTCAGGAAATCACTCAATCTATGGTTATTCAGATGCTGATTGGAGTGGTGATAGG GATGATAGGAAAAGCACAAGTGGTTACTTGTTCAAGTATGGTGAAGCTGTGGTCAGTTGGTGCTCAAGGAAACAAAACTCAGTGGCATTATCATCTTGTG AAGCTGAATATGTTGCAGCATGCCTAGGAGCTCAGCAAGCACTCTGGTTGCAGACTTTGGGCACTGAGTTGGGTGTGCAGAAGGAGGAGAAGATGGTGCT GTTTGTGGACAACAAGTCAGCAATCAACCTAGCCAAGAATCCAATCTCTCATGGTAGAAGCAAGCACATAGAAACCAAGTACCATTTCTTGAGAGATCAA GTTGAAAAGGGTAACCTTCACTTGGAATTTTGCAGATCTAAAGACCAACAAGCTGACTTGCTTACCAAGGCATTGAAAGGTGAAGCATTTCAAGAACAAA GGAAGCAACTAGGAGTGATAAGCTTAACTAGTATGAATTAGGAGGGAATGTTGATGTTTTAACATGTATTTCCATGTGTAATTCATAAGAAGATTAAGCT TTGTAATCAAAGTTAGTTGTTTTGATAGTTAGAAGTTAGTTGGTGAAAGTTACTATAAGTAGAAACTTTGTATTTGAAAGTTAGTTGATTCATTGACAAA AATAGAAAGTATTGCAATTCATTCATTCTACATTTTCTTCTCCATTTTCATTCTCTCTTCCACTCTCATTTTCAACTCTCTGCAACACTCAATCTCATTC TCCCCTCACTGCCATTTTTCTTCTTCATTTCTTATTCATTCTGTTGTGCAACAGTGGAGGCATAAGGCATTGCCCTCCAACACCTTATTCATGGCCACTT GGGCAATCTCTTAAGGATTTCTTCCAATGCCATTTTTCACATTTTTACATAATCCATAAATCCAATTCAAAATATTATGTGAGTCAAATATATTCTGTAG CCAAATGAGAGAGTATGAATAAATGATTATTTAGTTACTTACATTGATAAGAAATATTTAACAACATTGATAATGATTTCAAAATATAGAGACAGGTAGA AATTTATTGTAAAAAATATAATTTATTTAATTAAATATATTTAAATTTTGTGATCATATTATTAATATTTTCATTTTTTTTATGTGTATGATATATTATT TTTTAATTTAATTTTTAATATCACTATCTCCGGGTCTTAGAGGTGGGGAATTTTAGTCATCATATCTTAGTATTTTGTTGTGGGTGACTTCCTTCACCAT ACTTCGGTCCTTACGACCACCATCTTCGTCATCACATCACCACTTATTCTAACAAATACTTGATTTTGTGAGCATAAATATTGTTAAGTTTGGTGGGCAA GAGAAGAAAGAAATGAAATAGAAGAAATAACTTTGGTGGACGAATTTGTTTCCAATTTCATTAGACAGCATCAGTTTTCAGAATGACTAGCGACGTTCAG ATTACAATGCCATCACCAATTACTCTGCAGGGAAGAAATGTGGCAACGAAATTGTTCGAACAATATCCACATTTGGCCGTTGCAAGAGATGGTAATGAGC AAACAGCTTTGCATATGCTAGCACGAAAGCCTTCAGAAGAATTATACACGGAAGAGCATAACAAAGAAGAAGGGTCATCAAGAGGCGGTGTGTTGCTTCA AAAGTTGTGGTCTCACATTAGACAATTGGAACATGAGAAGACTTTGGATCTGATATCAAATCCTTCTGCGGTATTGTTTGATGCAGTAAAATATGGTAAC GTTAATGTTGTGAAATGGCTTCTCTACATGAATCGTGAACTATTGATGCAAAAGGAATCCAATGAAGGACGAAATATATTGCACTTTGTTATTTTATATA GACAAAGTAGCATTTTTAAACTTATACTTAAGATGCAGACAGTGAACCTTATAATACGAGCAGTGGATAAAGAACATAACAATGTTCTACACTATGCTGC TCATCTGCCAGAAACATCCTCAAGTTTGAGATCAAACATACAAATGCAAAGAGAGCTGGTGTGGTTCAAGGAAGTGGAGAAGAATGTTCCTGGTGAACTA AAGACAAGGAAAAACAACAAAGGTAAGACACCAAAAGATGTGTTCTATGGTAATCATAAAAAGTTATCGGACGAAGTGAAAGATGAAGCAAAAGGAATAG CTAACTCTGGCATGCTTGTAGCAACACTTATTGCTACTGTAGTCTTTGCTGCAGCTCTTACAGTTCCAGGTGACAAGGGCAGTGTTTGGTTTATTGTCTT CATATTGACAAATGCGGTTGCATTATTCAGCTCTTCAGCATCTATAGTCTCTTTCTTGTCAATTTTCACATCATCTAAATTCACAGAGAGCGAGTTTATC ATCTCACTACATCCAAGCTTGATTCTTGGTCTTACGTTACTATTTATCTCCATTGCCACTATGGTTCTAGCTTTTGCTGCAGCTTCCTTTTTAATCTTTG AGCACACACACAAGTGGGTTGCATATGTTGTGACTTCATTGGGGATTTTACCAGTATTTGCATTTCTTGCGCTCCAATTAACCCTTTTGGATGGTTTGCT TGACTACTTCTACTGTTTTAAACGGTATCGACATTCAGAGTCTGTATTAAATCAACAAGAAGAAGCAGTGCAAGTTGCAGAGATCACAACCAACAAGGCA GAAGACAAAAGCAACACCACCAACAAAGAGTATATCAATGAGAATGGCAAGTGTGAATTGGTAGAGGAAGAGGATCCTTCTTAGGATATTTCTAGAAGTT AGTTAAATTGTTTGATGGTTATTTTGTGTTTGTCATTCTCATCATCATGATGCTCTAAGGGGCCTTTGTTTGAGCTTTGGTTATTGACTTTCTATCATCA TTTGAAGCTAGCTAAGATATATATCTTCATGTGTGTAAACCATGTTTTGGTTAATAAAGTATTATATAAAAATGTTTCAACTCCTCTCATTAAAAA BLAST
Tissuepods
Gene nameLI_gene_144807; 
Additional informationdetails; 

Expression of Ll_transcript_390922

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_390922
BlastpRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.15% of identity
BlastxRetrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35% of identity
Eggnog-
Kegg-
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_020987654.1)
Pfamgag-polypeptide of LTR copia-type (PF14223.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;