Ll_transcript_390505

• Id Trinity: TRINITY_DN46467_c0_g1_i4
• Name Transcript: Ll_transcript_390505
• Sequence: GTTTGCAATATAAAATAATAAACGAAACAATTTCATAAGCTGCTTCCGTATTTTCCCGCTATTATTATTGCAGAAGAGTGAGAGAAATGGGTTCGAAAAC CCTAATGGATTTTTGGCAACCATCTTCGAAGCGATTGAAACAAACCCTCACTCCATCAATCTCCAAATCCGATGATCCCACCACCACTTCACTCTCCCTT CACCAAAAAGCACGCATCCAACACAACAAGCTTCTCGCCAAGTCCAAGCGCAATCTCAATCTCTGTCTCCAAAAGGTCTCCGATTCTAAATCCAAAGGTA TTCATTCATTACTATCATTCAACTATTAAAGGTTTATACAGTCGTTTTGAACATTATGATGTCGTTTATCACAATCTGCATCTACTTAGGGGAGTTTTTA GCACTAGAGGAGTTGTTGGTAGAAGACACGTGGTTGGAAGCTCTCAACGGTGAACTTGAAAAACCCTATGCCATTACTCTTTCCAAATTTGTGGAAACTG AGATTAGTAGCGGCAATTATGTGTACCCTCCTTCTCATTTGATTTTCAATGCTCTTAATTCCACTCCTTTTCATACAGTTAAGGCTGTCATTCTTGGTCA GGACCCTTATCATGGACCTGGTCAAGCGATGGGTCTCTCATTCTCAGTGCCTGAGGGTGTCAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTT AAGGAAGACCTTGGCTGTTCGATTCCTCCCCATGGAAACCTAGAAAAATGGGCTGTGCAGGGAGTTCTCTTGCTCAATGCTGTTCTCACAGTCAGGAAGC ATCAAGCAAACTCTCATGCAAAAAAGGGCTGGGAACAATTTACTGATTTTGTTATAAAGACAATCTCACAGAAGAAGGAAGGAGTTGTGTTTCTGTTGTG GGGAAACTCCGCTCGACAGAAATCGAGGTTGATCGATGCAACAAAGCATCACATTCTTGAAGCTGCGCATCCTTCTGGTTTATCTGCAAATAGAGGCTTC TTTGGCTGCAGGCACTTTTCTCGCACAAACCAACTTCTGGAGCAAAATGGGATCGGTCCCATTGATTGGCAACTATAATTGATATTTTAGAATTTCAAAC CTTTATTCCTTATATCAGAATCTTTTTTGAAGCATGCTACTGCAAGCTTTGGGGTGGTGTTTATATGAGCCCCTTTCCTCTTAATTTAATGATAATTATG TTGATTATAAAGTCTCCTAAGAAAAAAGATGCTGTTGTCAATAGTTTGGCCCTGCATGTGTAGTCACTTATGAGGATTGTGCAGTACTGAGCAATGATCA ATACTATACATTTTGTTCCACCTTTTTGTTATAGGATACTATATGGATTTCGTGCATCAACGATGTGCTGTCTTAATATTAGTATCCCATATTTTTATTG AAGAGAATCTTACAAGCACGAGATTACTTGCTTGCATGTGAATTTTCAGATCAAAGCATCTAAATGTGGGGTATGAGCACCTTTTATTTATTCCAAAAGA TAATGATTGTGTATGTGGAGTTTGTGATGGAGATGGAATTCTGTTAATTAGTTATTTGTTTAGAATCGTTAGAGCACACTCACGCGGTGGTTGTTCTTAA CAGGATAAGAATAT
• Tissue: pods
• Gene name: LI_gene_144838;
• Additional information: details;

Expression of Ll_transcript_390505

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.1
• PS3: 0.4
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390505

• Blastp: Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 76.09% of identity
• Blastx: Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 76.09% of identity
• Eggnog: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity)(COG0692)
• Kegg: Link to kegg annotations (AT3G18630)
• CantataDB: Link to cantataDB annotations (CNT0000282)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450955.1)
• Pfam: Uracil DNA glycosylase superfamily (PF03167.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;