Ll_transcript_390507

• Id Trinity: TRINITY_DN46467_c0_g1_i6
• Name Transcript: Ll_transcript_390507
• Sequence: GTTTGCAATATAAAATAATAAACGAAACAATTTCATAAGCTGCTTCCGTATTTTCCCGCTATTATTATTGCAGAAGAGTGAGAGAAATGGGTTCGAAAAC CCTAATGGATTTTTGGCAACCATCTTCGAAGCGATTGAAACAAACCCTCACTCCATCAATCTCCAAATCCGATGATCCCACCACCACTTCACTCTCCCTT CACCAAAAAGCACGCATCCAACACAACAAGCTTCTCGCCAAGTCCAAGCGCAATCTCAATCTCTGTCTCCAAAAGGTCTCCGATTCTAAATCCAAAGCAC TAGAGGAGTTGTTGGTAGAAGACACGTGGTTGGAAGCTCTCAACGGTGAACTTGAAAAACCCTATGCCATTACTCTTTCCAAATTTGTGGAAACTGAGAT TAGTAGCGGCAATTATGTGTACCCTCCTTCTCATTTGATTTTCAATGCTCTTAATTCCACTCCTTTTCATACAGTTAAGGCTGTCATTCTTGGTCAGGTA AGCTCAACTTAATAATCCCTATCACATGATTCTCAACATTTGTAGTTATAGCTTATAGTTGCGTGTATCGTAGCTCGTTGAATTAAAGTTTTTTTGACAA AAACAGTTTGCACAACTACAATATTATAATGGGTTGAGGTAAAAGTTGTCATTATGAGACAGAACTGGTTCTGGTTTTCTCAACATGCAATATCAAATGG CATGGAATACAAGGAGGAAGAGATATTGGTTCGGTTTTTCCTCGACAATGTCAAATACTGATAGGACTTCCCTTTAGATTTTGTTTAGGAGTTGGTTTGT TGAAGGAATGCAGAATAGTCAATTTGAAATTAAGAGTTATATGGTATTTTTATGAATAAATAAGGAATGATAAGGTAGATTTCTTAATAATCTATCACTA TCAATCTATCACTTTATTCTCCTCCGAAAACCAAATTTCAAACAGACCGTTAGACGTAGTAGTTTACTGACTAACAGTGATACATAGACCCAGCAATCCC GAGGAACAATTACTTTTAGATGTTACCCTTATTCATGTAATATTGGTTAGTTCATATGAGTAATACAGTGTTTGTACAATCTCTAACCTACAAGTAAGAC TAGTATTATTAAAGCAAGTAAGCAACTTATTTGGATAATTTTTCTCACAACCTGAGACTTTTATGCACAAAGTTGGTTTAGTTTGGTTAAAAATTATTAG GTGTCAGCAGAAGTTATCTGACATAATTGTTCGGATCACTTCTTCTTACAGTTAATATGTTCAGATAAGCGAGCTTTAAATCTTGAATCGTTCATTTTTC AGGACCCTTATCATGGACCTGGTCAAGCGATGGGTCTCTCATTCTCAGTGCCTGAGGGTGTCAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACT TAAGGAAGACCTTGGCTGTTCGATTCCTCCCCATGGAAACCTAGAAAAATGGGCTGTGCAGGGAGTTCTCTTGCTCAATGCTGTTCTCACAGGTTTGATT TTTTTGGGGTCCATTTTGTGAACTTCAAAATCATGTATATACAGTTTATATTTCACTATGTGCATGGTTAAGATACTGTCTTCCACTATTTTTGTGTTTT ATGTTTTTTTTCAAGTGGTGTTTTGTAACTAGATTTTTCTTTTTGAATTCAGTCAGGAAGCATCAAGCAAACTCTCATGCAAAAAAGGGCTGGGAACAAT TTACTGATTTTGTTATAAAGACAATCTCACAGAAGAAGGA
• Tissue: pods
• Gene name: LI_gene_144838;
• Additional information: details;

Expression of Ll_transcript_390507

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0.5
• PS2: 0.2
• PS3: 0.5
• PW1: 0.2
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390507

• Blastp: Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 44.97% of identity
• Blastx: Uracil-DNA glycosylase, mitochondrial from Arabidopsis with 44.97% of identity
• Eggnog: Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (By similarity)(COG0692)
• Kegg: Link to kegg annotations (AT3G18630)
• CantataDB: Link to cantataDB annotations (CNT0000175)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450955.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;