Ll_transcript_391873

Id TrinityTRINITY_DN46470_c0_g1_i3
Name TranscriptLl_transcript_391873
SequenceCAACAGGAGTGGGGGTGGTCAGGAGTGACCTTTTTTCCTTTCCTTTTTTTAATTTTGTTGTATTTCCCCTGGGTATATCCGGTTTTGCGTTGTATTATCC CGACATTAATCCGGTTTTATCGATATATAAAATACTTGTTTCTATTTTGACTATAACCGAGTTTAATGTTCTATTTTTATGTAAATGTCATCATCGTGTG ATAATATCTGCGTCCGAGTTTTTCTTTTGCAACCATAAAGGTAGGATGCGTAGAATGATGTGGCCTGTGTCGAGCTCTTATGTGAATCCGACAAGGTCGG TGACTAGGGGGACTTGGTCCACGTCTGGGTTTTCTTTCTATGGTAGAAGTGACCAGGGGGACTTGGTCCTCGCCTGGGTTTTTTCTTTCTAAGGTATGAG TGACCAAGGGGACGTGGTCCTCACCTGGGTTTTTAATTGAGATCGACAAGGTCGGTGACCAGGGGGACTTGGTCCATGCCTAGGTTTTTTCATTCTAAGG TAGGAGTGACCAGGGGGCATGGTCCTCGCATGAGTTTTTAATTGAAACCGACAAGGTCCGTGACCAGGGGGACTTGGTCCACGCCTGGGTTTTGTTGATC TGCACATAATCATGGGAAAATAATACCTCGTTGACATTAATATTGATCTTACACAACGGTCCGCCCATGTTGGGAATCAGACTTACAAGAATTTAAGCAA AAAATTGTCATAAATTGTGAGCATTCCATGTTCGGTGAGTTCTTTTGGTGGCGCTTTGTGCAGGTCGACAAATAGTTGGCATGGAACATAGTTGCTAGTT AGATCAGTGGCGTCCTTTTTCAAAGTCGGCCAAAAGTAACCGACACTTAGTGTCTTCTTCGCCAAAGCAGACGCCCTTAAATGATGCCCACAACTTCCTT TGTGTATTTCTCGGAGGACATAATTGGTTTGGGCAGGATCCAGACACTTCAACAAGGGAGTGGAGAACCCTCGACGGTATAACACTCCTTCAACGATGGT GAACCAAGAACTGAAGCGGAGTAATTGTTGTCTAGCCTTTCTGTCTTCCGGCAACTCGCCCCTTTGGATGTATCTGATAATTGGACCCGTCCAATCAGTT ATGACCGGCGCCTGGTGCACCTGCATGATTGTGGGGCAGGAAATGGTTCCATGAACTATTGATCGGTTGTTTCCCGGGCTCTTTGTGCTAGCCAATTTGG AGAGGATGTCGGCCCGTGCATTCTGTTCCCGGGGGACATGTTGGACGGTTGCTTCCTTGAAACCGGCCAGAAGTTCCCTTACTCTGGCGAGATATTTTCC CAACAATGGGTCCTTCACCTGGTATGCACCGTTGATATGGGATACGGCCAGCTGAGAATCACTACAAATGGAAACTTGCTCCACGCCAATCTCCTTGGCC AATTTTAAACCGGCGATGCATGCCTCGTACTCTGCCTGGTTGTTGGATGTTTGAAAGGATAATGTTAAAGAGTATTCTATGGCGACACCCTGTCCATTAT CCAATATTATCCTTTCCCCGATGCCTCTCGGGTTGGAGGACCCATCAACATAGATCGTCCATGTGCCTCCAGGTTCTGTCCCAGTCGTAGTTAGCTCGAC TACAAAATCAGATAGGACTTGTCCCTTGATTACCACACTAGGCTCATACAGAATGTCAAACTGGGAGAGTTCAATGGACCAGGAGATCATTCTTTCGGCC AACTCAGGCTTAGAGAGTATCTGTCGAATGGGTTGGTTTGTCCGGACAATCACCGGATGAGACTAGAAGTACTGTCTTAAAGGTCTTGTAGTTACCAACA AGGCGTAAGCCACCTTTTCCAACTTTTGATACTTCAACTATGGGCCTTGGAGTGCTTTGCCAGTAAAATACACTGGATGTTGGCCCGACTCATCTTCTCA AATTAACAACGCGACAACCGCCTCCTCAGTCACTGTTAGGTACAAGAATAGTGTTTCCCCCGGCTGGGGCTTCGTTAGAACCAGAGGGGTTGCCAACTGT TGCTTGAACCGGTTAAACGCTTGTTCACACTCCTTCGTCCATTCGAATTTCCGACTTTTCTTAAGGAGCTGGAAAAGTAGAAGCGAGTGTTTGACTGATG CTGGAAGGAATCGGGATAGTGCTGTCAACCGCCCGTTTAGCTGCTGAACTTCTTTTACCGATCGGGGGCTGCGCATGTCCATAACCGCTTGACATTTGAC CGGGTTGGCCTCTATACCTCTGCTGGTAATCAAGAAACCCAAGAATTTGTCGGCCTCAACCCCGAACGTGCACTTTTCTGGGTTAAGACACATATTGTAT TGTCATAGTCGGCGGAAGATAGTTGTCAGATTTTCCACATGCTCTTCCCCCGAGAAACTTTTGGCGACCATGTCATCCATATAAACCTCCATAATTTTGC CGATATCGTTCTTGAAGACCAGATTCTTCATCCTCTGGTAAGTGGCCCCGACATTTTTTAACCCGAACGGCATGACGGTGTAACAGTAAGCAGTGTGTGG TGTGATGAATGAAGTTTTTTTCATGATCAGGGGGTTACATCGGAATTTGGTTGTAACCGGAGTAGGCGTCCATGAAAGATAGGTATTCATAGTCGGAGGA GTTGTCAACCAACGAATCAATATCTAGAAGGGGGTACGGGTCCTTAGGGCATACCTTGTTCAAGTCCTTGTAGTCCACACACATCCTCAACTTTCCTGAA GGCTTTTTGACCAGGACTACGTTAGAAAGCCACGTAGTATAGGATATCTCTCGTATGAATCCAGCTTGTAACAGTTCTGCCACCTTCTTCGTTACCTCGT TTGCTCTATCCCCGCCCATTTTCCTTTTGCGTTGGGCCACAGGTTTTGCCCCAACCTTTGTAGTCAAGCGGTGTGAAATGATGGTTGAGTCAATTCTCGG CATATCCGCGACTGACCATGCAAATAGGTCACTGTTATCTTGAAGACATTTGACGAGCCTGACCTTCTGCCCTTATGGTAAATTGGAGCCAATGTGTACC ACATTATCGTTAATTGGGCCGACTTGGAGAAGGATTGTTTCTCCAGCAGGCTGTGGCCGAAAATGTGTATCATCTGCCCGGGCGTCCAACTCTACCAAAT GCACCGCCCTGTGCCTCTTCCTTGAGGGGTGGCTTGAAGAATCGGGCTGTGTGGACGGAGGCTCAACTGATAGTAGCTTCTGGCACTGTGTTGATCCCCC CGCACCTGGCATACCCTCAAGTCTGGTGAGAGGAATTTCATGTAGAGGTGGGGGGTAGAGACTATCGCCTCCAGTCTGTTCAAAGTTGGGCGTCCCAGAA TGCTGTTGTATGCTGACGCGCAATCAATAACCAAGAATTTGGCTTGGATTGTGCAGGACAAGGGTCGGCCCCCCACCGTCAGCCAAATATAAACGTATCC CCTTGGCGTTATTCCTTGTCCGGTGAAACCCACCAACTGACCATCATACGGCAAAAGGTCCTGGTCACGGAGTTCCATCTTGTTGAAAAGGTCTGTGAAC ATAATGTCCGCCGAACTCCCCTGATCGACGAAAAGGCGCCCTACCTTTTTATTGTTCATTTTTGTCGTGATGACTAGAGGGTCGTCATGTTCCCTTATGA CGCCGTGAAAGTCCCGATCGTCAAAACTGATTGCCGGGGTGGACTATGTGTGCTGTCTGATGCCTGAATTGTGGAGGTTTGCTTGCATGACCTCTCTTAC ATACCGTTTATGGGCGGCCCGGGATGTACCTCCTGTTGTGAAGCCGCCTGATATGGTATTGATATCAACTAGGTTGCAACCCCGGTAACTTTCATGCCGC CTTCTGTCCTGAGGACGCTCCCTTTGATTTCCTGGGGGGGATCGTCTTCGCGGAGGGTTTTTCCGACGAGGGGGAGATCGGGTTGTCCGGTTTTGGCCGG CGATGTAGTGCTTGAGGTGGCCCGCCCGAATCAAATCCTCTATCGTGTCCCGGAGTTGGGCGCATTCTTCTGTGACGTGCCCAAATACGCTGTGGAACTC GTAGTATTTGGACCTGTCTTGACCTGCCACTTTTCTGTTAGGATTTGGTTGGGGTAGTTGCACCAGGTGGGTGGCCATGACCTCCTGGAGAATTCTCGTT CTGCTAGCGTTAAGAGGTGTATACGCCATGTACTTAGGTTTTTTGAATCTTTGCTCCTCACGATGTGAATCATGGTATTTGGACTTTTTGTCCCGTGAGG GGGGTGATGATCTTGACGGTCCACCGGCGAGCGGTGTGGCCTGGTTTCTTCGATGTTGATGAATTGTTGTGCGATGACCCTGACTTCTTCCATAGTTAAG TCAGAGAATTTGGCCAATTCCTGATGGAAAGCTCCATCGTTTAGTCCGGATACCAAAATATGGACGACGACTGCTGGCACCAGGTTTCGACTCTCATTGC TTATATGTTGAACCGGTCCAGATATGCTCGGAGCGATTCATTGGGACTCTTCCTCACAGCGGAGAGGGTGTAAGAAGAGGGGGGCTGCTCCCTACTGGAT GTGAATCGGAGGTTGAATCCGTTGGCCAGTGCATCCCATTGACCAATGCCATTGGCTGGTAGGCGAGTAAACCATTGCAAGGCCGCCTTTTTTAGTGTGA GGGGGAAAGCACGCCACATGATGGCATCGGACGCCCCATGAAAAAGCATGGATGCTTCGAATGCATCGAGGTGGTCCTGGGTCGGTTGTGCAATCGTATT GGTCGATGTTGCTAGGGCGGGTTGCATGCTTAGGGAGCGGTGTGTTCATTATGTCCTGGGTAAAGGGGTGGCGGGCTCGAGAGGAACCTTCCACGGGTCG GCGAGAGGTTTGGTGGGTATAAGTTCGGGCGTGGGTTGTAGTGATTGTGATGGGTCGTTGTTGGTTCTGGGAGTGGTGGTCGGATTCAGCACTTGGCTCG GGTTGGGGTTAGATGGTTGATATGTGGGATTGTTGACTCTATTGTGTAGTTCTTCTAGTATACGAGTTTGTTGATTAATAACCCTATTTTGGTTTTCAAT CATCTGGAAGAGCATTTGGGTGGTGATGGCGTTTGGTGCGGGAGGGGGTACTGGTGGTATGGGTGGTTGTTGGTCGTGGATGGAATGGTGGGATTCTTCT ACAGATGGGTCTTCTATATTTTTAACGGAACAGTTGTTGTTTCGAGTGTTTACCATGGTTGTAGGTAAGCCACAGACGGTGCCAATGATCTATGTATAAT AGATCGGGTAAGTAACGGTGAGTAAGTCCCTGGGTCGGGC BLAST
Tissuepods
Gene nameLI_gene_144860; 
Additional information-

Expression of Ll_transcript_391873

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_391873
BlastpRibonuclease HI from Halobacterium with 33.96% of identity
BlastxTransposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 28.28% of identity
Eggnogribonuclease H activity(COG0328)
KeggLink to kegg annotations (VNG_0255C)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432977.1)
PfamRNase H (PF00075.23)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;