Ll_transcript_390429

• Id Trinity: TRINITY_DN46471_c1_g1_i10
• Name Transcript: Ll_transcript_390429
• Sequence: GGGAGCTTTATTGAATATTTTGAGGGTCTCACCTATGAACATGTCAACTTCATTTTTTCAGGTGCATCACATGCTCAGGAGAGTTCCTACCCTTCAAGTT CAAGCTTTTACAAGTTTGGACTATCTGAAGTTGATAGTAATCCATACTATCGTTACAGTCATGGTGATGGCTTAAGCCATCATCAATCACCAGTGGATGA CTATAGGAGGCCTTTGGGAAACTCACCGATAGTTAGTGAACAGACGACAACAGCAAATACAGAATGGGGAGAAAGTGTAAACACTGACATACGAGACAAT TCTTTTGAATGTCCACGAAGACATCATAGTAATTCCGATGATTATCAGGTCATTTGGCAAGACAATATTGATCCTGATGACATGACCTATGAGGTTAGAT TGGAGCCTTAGATACCATCTCTTCCAGGGCTTTATAAGATTTGAGTCTTAGATACCACCTCTTCTAGGGCTTTATATATTTCTTCCAGTCTTCCTTAAAT TACAGATACTATATATTTGATTTCCTGATAGCATAGTGTCAAACTTCTAGATATTTACTCCCGAGTACCAATTAATTAAAGGTTAAAGTATAGAGCCCCT TATATTTCTGATGATTCCCTTGCAACTCCCCTTATTAATATCGTATTATTGCAGGAACTACTTGAATTAAGCGAGGCTGTCGGAACTCAAAGCCGTGGTC TCACCCAAGAACAGATTTCTTTGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCTTGAGGAAAAAGTCACGGGATGAGAGGTAACATTTGGGTTTTTG CACTGTGTTTTAATACAATTCTTGCCTTTCTTATGCATTCAGCCATTACATTTGAAAAAATTCATGCATCTAACTTCAGAAATCCTTATTTCTGCTTTTA TTCTTCACCCACACAACTTATTGGTTGACTAGTCTCTAACAAACAATCCTGCTTTCTTCTGTGTGTCCAAATTGACCTTGGAGCTTAGAGATTGCTGCTA TTGAGCTTATTTTTTTGGGTTAAATTTAATCACTGTGATATTGATATGTCTTCTTTAATTGTCCAAACACTACGTTGTATACCTTAAATGCAATGTATCA TGTGGCTAAGATGAATAAGGTGCATATCTCAGATGAAGATGATATATCAGTTAGTGAATGACATAGGAAGGTAGATTCTTATGAACTAAGAAATGCTTAG AGCCTTAGATTATCAATGAACATTTCAACCATCAATTATTGCCCTAATATCTAATTGTACTCTTTTGTATAATATCTAACTAAGAAAAAAATGTGGAACT TGGAAAGGTCCAGATGGGTATTGCACTTCCAAACCTTGCCTGTTTGCTTATGGCGGAAGATCAAATATTTGGATCTTGCCTCCTCTTTCCTAACTTGTCT TTTTGTTTAGATGTGTTATTTGCCAAATGGAATATAGAAGAGGGGACAAACGGATCACTTTGCCATGTAAGCATATGTATCATGCTCGTTGCGGGAACAA ATGGCTTAGCATCAACAAGGCTTGTCCGATATGTTACACAGAGGTGTTTGCAGACAAGTCAAAACACAAATAATCACAGATGAGCAAATAGAAGTAACCT GCAATCTTTGCATGTTTCTGTTTGTTTCTCCTTGAGTTTGGGCCTTCAGTTGAAATATATTCATATGCCATGTTTCCTTTTCATAGTCAAAGGACCTACT ATGTTGGGTTTTAGTGAAAATACAAAGAGTGCAGTCACATGGGACATGCTTCATGGTTGTGTATTGGAGAGGCTGGCTTATGGTACTTTTCATAGTATTT GTATACAATGTCCTATGTGTTCATGTTTATTGTCACTCACTACTGATAGTGTCTATCTACATTGAGGGAATATGAACATGTATTTGCAATTTTTATGAAA AAGTTTCAGACTCCTTGTGTTAAACAATTGAACTTGAAATTGCAGCACCTCACAAAAATGAAATTGCAGCACCTCAC
• Tissue: pods
• Gene name: LI_gene_144873;
• Additional information: details;

Expression of Ll_transcript_390429

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390429

• Blastp: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 31.16% of identity
• Blastx: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 59.18% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G63530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454117.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;