Ll_transcript_390438

• Id Trinity: TRINITY_DN46471_c1_g1_i19
• Name Transcript: Ll_transcript_390438
• Sequence: CATAACGGTTGAAGAACGGGTGCGATGCAGTTGAACATCGTCCATCTAACGGAGTTGGCGTGTTGGTTAAACCAGCGCTGTGCTGTGCTGTGCATAAAGT AGCATTTTCCGCTTCGGTTATGATCAGTGGAGCTTCCGAGATTTTTCTGCCTCCATATGTGATCTCCAGGTTTACATTTTAGGAGTAGCTGAAATGTTGG GAGGCAAATGGTTTTGGTGTTAATTACTTCATCATTTTTTATGGATCTAATAGCTTGGTGAATCTGTGAATATTTGTATTACTTGTCTAAAGGGAAGGAA TCAAAATGAGTTGGAGCCCACACATGGAGGTCCACTACAATAACATCAGTTATCCCTATAATACAGCAGGGAGCTTTATTGAATATTTTGAGGGTCTCAC CTATGAACATGTCAACTTCATTTTTTCTGGTGCATCAAATGCTCAGGAGAGTTCCTACCCTTCAGCTTCAAGCTTTCACAAGTTTGGACTATCTGAACTT GACGGTAATTCATACTATCGCTACGGTCATGGTTATGATGTAAACCATCATGAATCACCGGCGGATGAGTATAGGAGGCCATCAGAAAACTCATCGACAA CCAATGAACAGATGGCAGCAGCAAGTACACAATGGGGAGAAAGTGTAAACACTGACACACAAGACAATTCTATTGAACGTCCACGAAGACAACATAGTAA TTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGATGACATGACCTATGAGGAACTACTAGAATTAGGTGAGGCTGTCGGAACTCAGAGC CGTGGTCTCACCCAAGAACAGATTTCCTTGCTTCCAGTTTCGAAGTACAAGTGTGGTTTCTTCTTGAGGAGAAAGTCACGTGATGAGAGATGTGTTATTT GCCAGATGGAATATAAGCGAGGGGACAAGCGGATTTCTTTACCATGTAAACATATCTATCATGCAAGTTGTGGAAACAAATGGCTTAGCATCAATAAGGC ATGTCCAGTATGTTACACAGAGGTGTTTGCAGACAAGTCAAAACACACATAATCACATGAGCAAATAGAAAGTAATTTGCAATGTTGCATCTGTGTCTCC TTGAGCTTGGGGTATGTCATAGAAATACATTCATTTGTTATGCTTCCTTTTTCCTAGTCAGACTACCCATTACATTCACCTTCGTAAAATTCGTAAAAAA AATTACAAAGAGAGTAGTCCTGTGATTCATAATCACAGTTTTATAAAGAATATGGAAATGGATATTATTTGATTTTGTAACATATTTATATAGTATCCTA TGTGTTCGTGTCTAATATTGTGATGAGTGTGATATTTTTGCTCCGTAAATGTAAACATTTATACACAAACGGTATATTCCTAACCATTTATTTATATTAC TTATATTTAAAAGTTAAACAATAAAA
• Tissue: pods
• Gene name: LI_gene_144873;
• Additional information: details;

Expression of Ll_transcript_390438

FPKM

• PAB: 0.3
• PNAB: 3.8
• PS1: 4.4
• PS2: 3.8
• PS3: 4.7
• PW1: 4.4
• PW2: 2.3
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_390438

• Blastp: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 42.97% of identity
• Blastx: E3 ubiquitin ligase BIG BROTHER from Arabidopsis with 42.97% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G63530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448595.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;